ggKbase home page

AMDSBA3_107_2

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: comp(2267..2773)

Top 3 Functional Annotations

Value Algorithm Source
glycoside hydrolase family protein similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 163.0
  • Bit_score: 136
  • Evalue 9.20e-30
Polygalacturonase (Pectinase) family n=1 Tax=Prevotella bryantii B14 RepID=D8DYK3_PREBR (db=UNIREF evalue=3.5e-11 bit_score=73.9 identity=38.9 coverage=78.69822485207101) similarity UNIREF
DB: UNIREF
  • Identity: 38.9
  • Coverage: 78.7
  • Bit_score: 73
  • Evalue 3.50e-11
Pectin lyase-like (db=superfamily db_id=SSF51126 from=1 to=128 evalue=2.4e-23 interpro_id=IPR011050 interpro_description=Pectin lyase fold/virulence factor) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.40e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicyclobacillus acidocaldarius → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 507
GTGTGGAATGGCCATGGCGGTGTGGCTATCGGAAGTTACACAAACGGCGGTATGAAGGACGTTTTGGTCCGCAACGTGAGCTTCAACGGTACAGAAGACGGAATTCGTTTCAAGAGCGCGGTCGGCCGCGGCGGAGTGGTGCAAGACATTTACTTTGACAATCTCCAGATGCAAAACATACAGGACTATGCGTTCAGCATGAACGCAAATTACAACAACCAGAGTCCTGCAACCGGGTCTTTGACATCACTCCAATATGTACCGCAATTCCAAAACATCTCAGTTAATAACCTTATCGTCGACTATGCAGGTCAGGCCATCCGAATCACCGGCTTAGCATATGCCCCGATCTCAAATATCTCGTTCAACAACGTCACTTTTAAGGCTGCTCACCAATACGCCATCGTGGATGCCGACAATGTTTCCATGCACAATGTTAGTTATCAACAGGCAACCGAACTTGGAGCTGTCTACCATTACGGCATTAGCGGACCTGGCCCGGAGTAG
PROTEIN sequence
Length: 169
VWNGHGGVAIGSYTNGGMKDVLVRNVSFNGTEDGIRFKSAVGRGGVVQDIYFDNLQMQNIQDYAFSMNANYNNQSPATGSLTSLQYVPQFQNISVNNLIVDYAGQAIRITGLAYAPISNISFNNVTFKAAHQYAIVDADNVSMHNVSYQQATELGAVYHYGISGPGPE*