ggKbase home page

AMDSBA4_3_24

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(24690..26045)

Top 3 Functional Annotations

Value Algorithm Source
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 431.0
  • Bit_score: 470
  • Evalue 4.20e-130
Sugar transporter n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PTZ3_CHIPD (db=UNIREF evalue=7.0e-30 bit_score=137.5 identity=27.1 coverage=92.03539823008849) similarity UNIREF
DB: UNIREF
  • Identity: 27.1
  • Coverage: 92.04
  • Bit_score: 137
  • Evalue 7.00e-30
transmembrane_regions (db=TMHMM db_id=tmhmm from=111 to=133) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1356
ATGCAGAAGCTAGATTGGACGCAGTTGGATAACAATAAAATGAATCGGCAATTGTGGGTGTGGCTAATTTTGGCTGCCGCCGCGTGGTTGATGGAGTCGTACGATATAGGGCTTATCGGGGTTGTTTTGGTTCCTTTGCACCAAATTTGGCATCTCACTGCATCGGATACCGGACTCGTTGTGGCTTCAGGCACGCTCGGTGTTGCGTTGGGCGTAGCACCCGCAGGGCGTTTAGCGGATCGTTGGGGACGAAAAAAAGTGATGCTAGCTGCCCTAACTGAGTATTCCTTAATCACCTTAGCCACGGGTTGGTCTCCTAACTGGCACTGGTTTGTAGTGTTGCGATTTGTGGCTGGATTAGGTTTGGGTGCAATGTTTCCACTGCCCTACACGCTATTGACGGAACTTAGTCCGAAGCATGCCCGTGGACGGGTAGCGGGGATCCTAGATGGGTTTTTGTCCGTGGGTTATTTTTTGGCACCATTGGCAGCATCGGTAACCATTGCCTTATGGGGATCGGCATCTGGATGGCGTCCGCTATTTTGGGCAGGAGGCTTGGGACTGCTGTTAGCCTGGCTTTTGGCGCGCCACCTGCCCGAGTCTCCCAGATGGCTAGAACTACATGGTAAGAGCGGAGATGCGCAAGGGATTGTACAACTGGCCACAGGTAAAGCCCCAGTGATCGAGAGCGAAGTTGAGCACACGTCGGATTCTCAACCGCGAAAGCACATACTCAGTCGTGGGCTTATTCACCGCAGCATTATGCTATGGATTAGTTTTCCCGCCATCTTGCTTATGTTTTACGCCATCATGACTTTTATGCCAACGATACTGCATCAAGAAGGAGTGCCCTCTCAGTGGGTTGACAGGCTTGCCGCCTTGATTATGGCAGCGTCAATTCCCGGCAAGTGGCTGGAATCCTGGTTAGTGGAAAAATGGGGTCGAAAACCAGTGATTGTTGGCTTCTCTCTTCTTGCTGCCATTGCGGCGTTGGCTTTTCCGTTGGCCCATAGTTTGTCGGGATGGATTGTCATTGGGCTGGCATTTGCTTTCTTTGGGGTTGCCGTGGATCCGGCGATGAAGGTTTTCGCAGCAGAACAATATCCTACGCCTATCCGTGCCACCGGAGTGGGGATCGCTGAAGGCTGGGCACGATTTTTGGGAGGTGCCTTGGCACCTTACTTAATGGCCCTATGGCTGGAAAACGGTGGCATTGCGGTCAGTTTTGACTTTGTGGCGGCAGTCGCCTTGCTTGGGGCTCTTGCGGTGGCTTGGCTAGGCCGCGAAACTAAGGGCCAAATTCTGGAGTCTGTAGAATATCGTCCCGTATCATCGGCGGCGCGACCAATTCAGTGA
PROTEIN sequence
Length: 452
MQKLDWTQLDNNKMNRQLWVWLILAAAAWLMESYDIGLIGVVLVPLHQIWHLTASDTGLVVASGTLGVALGVAPAGRLADRWGRKKVMLAALTEYSLITLATGWSPNWHWFVVLRFVAGLGLGAMFPLPYTLLTELSPKHARGRVAGILDGFLSVGYFLAPLAASVTIALWGSASGWRPLFWAGGLGLLLAWLLARHLPESPRWLELHGKSGDAQGIVQLATGKAPVIESEVEHTSDSQPRKHILSRGLIHRSIMLWISFPAILLMFYAIMTFMPTILHQEGVPSQWVDRLAALIMAASIPGKWLESWLVEKWGRKPVIVGFSLLAAIAALAFPLAHSLSGWIVIGLAFAFFGVAVDPAMKVFAAEQYPTPIRATGVGIAEGWARFLGGALAPYLMALWLENGGIAVSFDFVAAVALLGALAVAWLGRETKGQILESVEYRPVSSAARPIQ*