ggKbase home page

AMDSBA4_4_12

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(12069..13721)

Top 3 Functional Annotations

Value Algorithm Source
family 5 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 543.0
  • Bit_score: 443
  • Evalue 1.20e-121
ABC-type transporter, periplasmic subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8TSA3_9FIRM (db=UNIREF evalue=2.2e-118 bit_score=431.8 identity=41.4 coverage=97.09618874773139) similarity UNIREF
DB: UNIREF
  • Identity: 41.4
  • Coverage: 97.1
  • Bit_score: 431
  • Evalue 2.20e-118
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidimicrobium ferrooxidans → Acidimicrobium → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1653
ATGAACACTCGCCGTATGGCTCTATTTGCTCTTCCCCTAATCGGTTCTCTGACATTGGCTGCTTGCGGATCGCAAGGTGCGACGTCTACTGCAGCGTCTGGCAGCACTCCTCCGATGGTACTGTCGGTAGACCCTGGATCCCCGCTATACACCGACAACTGGAATCCTTTTTCGCCGAATGCGGTTTGGGGACAGGCGTGGATATACGAAACGTTATATTACATTGACGCACAGAATGGACACCAAACACCTTGGCTTGCAACATCCTATAAGTGGAATAGCCCTACTCAATTGACCTTTACCATTAGGCCAGGGGTTCAGTGGTCCAACGGCACACCGTTTACGGCTAATGATGTAGCTTTCACGTTTAATATGTTAAACAAATTTCCAGCGCTGGACACCAACGGCGTTTGGACTGTGCTCAAGAGTGTGGCAGCAAAAGGAAATACGGTGGTGTTTGACTTCAAAACACCCGATGTCCCCGCTTTCACGTATATTGCTGAGACCCCCATTGTACCGGAAAGCATTTGGTCAAAGGTTAAGAATCCGGTAACATATACTGACCCGCATCCGGTGGGCACCGGAGCCTATCTTGAGAAGTCGTATACGCCTCAAGAATTCGTGCTGGTCAAAAATCCCCATTATTGGCAGGCCAGCAAAGTCAAAGTCCAAACAATCGACTTCCCGGTGGTGTCCGAAAACGCCAACACCGTGTGGCTGAACCTTTCCGAAGGAAAGTATACGGCGGCTAACGCCTTTGCGCCCAATATTCAAAAGATCTATATAAGCAAGGATCCAAAATACCGTCATATCTGGTTTGCACCAAGTGGAGCGTCTAACTTATTGATGAATCTTACCAAATACCCATTCAATAATGTGACGTTTCGGCAAGCCATGGCTTATGCTATAAATCGACCTAAGGTTAGCTCCAAGGGAGAATATGGCTACGAACCTTTGGCTAGTATGACGGGCCTTACGTTACCAGCAAACAACGCCTATTTGGATAAATCTTTGGTGGCACAATACAATTATCATTACGATCCAGCCAAAGCGGCTCAATTGCTGTCAAGCATGGGGCTTAAGAAAAACTCCCAGGGCTTATTGGTAGGCCCCAATGGCCCCATATCATTTACGATGATTGTGCCTACTGGATTTAGTGACTGGATTGAAGACGCCGCTATTATTCAAAGCAACCTTAAGGCACTAGGAATTACCGTAAATGTTCAAACGCCGTCAGTTTCTACCTGGGTCAGTGATATGCAGACCGGTACCTTTGATATGACGCTAAACTTTGGGTTAAACCAATACAACCCATATTTTTACTATGAGTCCGATCTTGCAACGAGCAACAGTGCTCCTATCGGACAAGACGCTACCTCAAACTACGAGCGCTATTCTAACCAAAACGTGGACAACTTGCTCAATGAGTACGCGCAGTCGACTAGTGCGACCCAGCAAAAGCAGATTATCGATCAACTGGAGCAAGTTATGCTTCAGCAAGTACCCGTCATTCCAATGTTTTACGCGGCCAACTGGAACGAGTATGACAATCGTTACTACGTAGGATGGCCAGATGCATCGAACCCCTATGTGACCCCGACATACGCTTTGCCGGACGTAGAGATGGAATTCACGCATTTAAAGCCTAGATAA
PROTEIN sequence
Length: 551
MNTRRMALFALPLIGSLTLAACGSQGATSTAASGSTPPMVLSVDPGSPLYTDNWNPFSPNAVWGQAWIYETLYYIDAQNGHQTPWLATSYKWNSPTQLTFTIRPGVQWSNGTPFTANDVAFTFNMLNKFPALDTNGVWTVLKSVAAKGNTVVFDFKTPDVPAFTYIAETPIVPESIWSKVKNPVTYTDPHPVGTGAYLEKSYTPQEFVLVKNPHYWQASKVKVQTIDFPVVSENANTVWLNLSEGKYTAANAFAPNIQKIYISKDPKYRHIWFAPSGASNLLMNLTKYPFNNVTFRQAMAYAINRPKVSSKGEYGYEPLASMTGLTLPANNAYLDKSLVAQYNYHYDPAKAAQLLSSMGLKKNSQGLLVGPNGPISFTMIVPTGFSDWIEDAAIIQSNLKALGITVNVQTPSVSTWVSDMQTGTFDMTLNFGLNQYNPYFYYESDLATSNSAPIGQDATSNYERYSNQNVDNLLNEYAQSTSATQQKQIIDQLEQVMLQQVPVIPMFYAANWNEYDNRYYVGWPDASNPYVTPTYALPDVEMEFTHLKPR*