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AMDSBA4_7_37

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(38221..38760)

Top 3 Functional Annotations

Value Algorithm Source
rimM; 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 177.0
  • Bit_score: 162
  • Evalue 9.80e-38
Ribosome maturation factor RimM n=7 Tax=Lactobacillus RepID=RIMM_LACPL (db=UNIREF evalue=3.6e-14 bit_score=84.0 identity=31.0 coverage=91.66666666666666) similarity UNIREF
DB: UNIREF
  • Identity: 31.0
  • Coverage: 91.67
  • Bit_score: 84
  • Evalue 3.60e-14
seg (db=Seg db_id=seg from=90 to=102) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 540
ATGAGTAGCCACCGTCCCCAGGACCATGAAGGGTTTGTTATGGTGGGAGAGATTGTCGGAGTGCATGGCATTGATGGCACCATGAAAGTGTACCCGACAACCGACTTTGTCGATCGATTGGTACATCGTAAGTCGGTGTGGGTGTCTTCAGATACGCAACCCGTGGCGGTCGTGGAAGCGAAAACGCATAACAATGTGGTGTTGATGCGGCTGGCGTCAGTACGCACGCGAGAACAAGGATTGCTGATGCGCGGGAAAACCTTATGGGTCCCCGTCGAAGAGCTTCCGCCATTGCCAGAAGGGGAATACTATTGGCATCAACTGTTAGGGATGCAGGTTGAAGAATGTGATACCGGAAGGGTTTTGGGAACGCTGCAGCATGTAATTCGGTCGGGACAGCATCATGACTTGTTCGAAGTCGACCGTCCCAGTGCCAAACCGTTGCTAATTCCGGCGTTGCGGGCTGTAGTCCGGGACGTTGACGTAGAGGCAAAAGTCATGCGGGTTGTCCTGCCTGAAGGGCTGGAGGATGCAACCTAA
PROTEIN sequence
Length: 180
MSSHRPQDHEGFVMVGEIVGVHGIDGTMKVYPTTDFVDRLVHRKSVWVSSDTQPVAVVEAKTHNNVVLMRLASVRTREQGLLMRGKTLWVPVEELPPLPEGEYYWHQLLGMQVEECDTGRVLGTLQHVIRSGQHHDLFEVDRPSAKPLLIPALRAVVRDVDVEAKVMRVVLPEGLEDAT*