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AMDSBA4_12_31

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(31806..32393)

Top 3 Functional Annotations

Value Algorithm Source
(db=HMMPfam db_id=PF00440 from=13 to=59 evalue=5.9e-16 interpro_id=IPR001647 interpro_description=DNA-binding HTH domain, TetR-type GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.90e-16
Homeodomain-like (db=superfamily db_id=SSF46689 from=5 to=79 evalue=5.5e-14 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.50e-14
Tetracyclin repressor-like, C-terminal domain (db=superfamily db_id=SSF48498 from=80 to=190 evalue=4.8e-12 interpro_id=IPR011075 interpro_description=Tetracycline transcriptional regulator, TetR-related, C-terminal) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.80e-12

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Taxonomy

Thermobifida fusca → Thermobifida → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGGAAGATTTATCAAAAAATCTATCAGAAACAGCCATTCTTGAAGTTGGCGCACGATTGCTTGCCCAACATGGGTACCATCGGGTAACGCTGGAGATGTTAGCTAATCAGTTTGGCGTAACGAGGCAAGCCATATATTACTACTATCGTAGCAAAGAACAATTACTGGAGGCCATCTATGAGTCAGCCATGATTGGCTTGCTTCACGACTGGGATGTAATCTTGACCGAAGACAAGCTTCCTCTAGTGAAATTCACCGAGGCATTGAGGGCATTTATCCGGCGAGTTCTAGGCCAACCGACTGCGGTGCTGGTCTTGAATACTTTAGAACGCGAATTGGACGAGCCTTTCTATCAGATGCAACGGAAACGTTGGCATGAGTATTTGCTAAAGTTGCGTATTTTGTATAATGCGGCTTGTGACCAAGGACAAGTTCTGCCCATCGACCCCCATATTGCTGTTTATAGTCTTATTGGGGCAGTATTGTCTTTGCCGCAATGGTACCGGCCCTCCGGCAATTTAACGCCTGAAGATATTGAGCATCAGATTATGGGTCTTTTGGAACGAGGGTATGTACGGTTCGCCTGA
PROTEIN sequence
Length: 196
MEDLSKNLSETAILEVGARLLAQHGYHRVTLEMLANQFGVTRQAIYYYYRSKEQLLEAIYESAMIGLLHDWDVILTEDKLPLVKFTEALRAFIRRVLGQPTAVLVLNTLERELDEPFYQMQRKRWHEYLLKLRILYNAACDQGQVLPIDPHIAVYSLIGAVLSLPQWYRPSGNLTPEDIEHQIMGLLERGYVRFA*