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AMDSBA4_13_28

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 24008..24478

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 35-epimerase-like protein similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 156.0
  • Bit_score: 264
  • Evalue 2.70e-68
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZIV4_9PROT (db=UNIREF evalue=6.9e-09 bit_score=66.2 identity=37.6 coverage=58.59872611464968) similarity UNIREF
DB: UNIREF
  • Identity: 37.6
  • Coverage: 58.6
  • Bit_score: 66
  • Evalue 6.90e-09
DTDP-6-DEOXY-D-GLUCOSE-3,5 EPIMERASE (db=HMMPanther db_id=PTHR21047 from=7 to=151 evalue=2.9e-36 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase-related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.90e-36

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 471
GTGAGTCACTTTGGCAAGATAGACGGCGTGGTCGTGAAGAACTTAGTGCGCCATCCTGATGATCGGGGTTTTTTTCAAGAAATTTTACGTGATGATGAAGGGCTTTTGCGCCGGTTTGGACAAGCATCGTTGTCAATGAGCTATCCTGGGGTGATTAAAGCCTTTCACTACCATGAATTACAGGATGATTTGTGGTTTTTTCCCGTGGGGTCGGCGCAAGTAGTTTTGTACGACCAACGGGTCGGATCCAAAACGCAGGGCATCACCCAAGTCTTATACCCTGGTCAAGACAATCCCCTCTTGATCGTGATTCCGGTAGGGGTATTGCATGGATATCGGGTACTAGGGAACCAGCCATTGATGATTGTCTACTTTACAACCGAATCCTATCGGGCCGATTCCCCAGACGAAAAGCGAATCCCGTGGAATGATGCCACCGTGGGCTTTGACTGGACTACACAAAACCGCTGA
PROTEIN sequence
Length: 157
VSHFGKIDGVVVKNLVRHPDDRGFFQEILRDDEGLLRRFGQASLSMSYPGVIKAFHYHELQDDLWFFPVGSAQVVLYDQRVGSKTQGITQVLYPGQDNPLLIVIPVGVLHGYRVLGNQPLMIVYFTTESYRADSPDEKRIPWNDATVGFDWTTQNR*