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AMDSBA4_14_18

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(12296..13078)

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=2 Tax=Sulfobacillus acidophilus RepID=G8TUY3_9FIRM (db=UNIREF evalue=1.8e-62 bit_score=245.0 identity=52.2 coverage=96.93486590038314) similarity UNIREF
DB: UNIREF
  • Identity: 52.2
  • Coverage: 96.93
  • Bit_score: 245
  • Evalue 1.80e-62
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 255.0
  • Bit_score: 240
  • Evalue 4.10e-61
transmembrane_regions (db=TMHMM db_id=tmhmm from=74 to=96) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 783
GTGAGTGCTGGTTCCTTATTGTCCCGAATTTTAGCGGTTGCCGTGATAGTCGTTGTTGGCATGCTTCTTATTCGCGTAGCGCAACATATGGTCAACCGCGTTGAGCGAAAAAATCGAAATCAGGGATTAGCCGCGCGTCGTACTACAGTTTATCGGCTTTTGATTTCTGTCACCCGCTACGCGGTCGATTTTCTGGTTATCGTGATGGTGTTAGACCAATTTCATGTGCACACTACCGCAATTGTTGCAAGCGCCGGGATCTTGGGGTTGGCCGTGAGCTTTGGTGCTCAAGGTCTAGTCCAAGACGTCGTTACCGGGTTGTTTCTCTTGTACGAAGATCAGTTCGTTGTAGGTGATTTTATTACCTTGCCGAATTTAAGTCTTTCTGGAACCGTCGTGGAAGTAGGCATACGCATTACGCGCCTCAGGGGTAGTAGCGGGGAGTTGGTGATTGTACCCAATCGACTGATACTCGAAGTACAAAATCGCAGTCGTGGACAAACCACAGTAAGCGTCATGGTGCCAGTGTCCTCGGCGGAGGATCCCGATCGGGTGCACGCAGTATTGCAGGCCGCCGTTGATGAATTGGCCGATACCACCCCGGGGGTAAAGGTGGCTGGGATTGATAGTTTTACAGTTGGACAAGTCATGTGGACAGTTACTGCGCCTGCTGACTATGAAAAAGGAGCGATGGTGGACAAAGCGCTCAAGGCTAAAATAGCGCGTGTTCTGTATACCAACGGCATGGTAGCAGGTGCCGCGAAAGGATCGCCCCATGAATAA
PROTEIN sequence
Length: 261
VSAGSLLSRILAVAVIVVVGMLLIRVAQHMVNRVERKNRNQGLAARRTTVYRLLISVTRYAVDFLVIVMVLDQFHVHTTAIVASAGILGLAVSFGAQGLVQDVVTGLFLLYEDQFVVGDFITLPNLSLSGTVVEVGIRITRLRGSSGELVIVPNRLILEVQNRSRGQTTVSVMVPVSSAEDPDRVHAVLQAAVDELADTTPGVKVAGIDSFTVGQVMWTVTAPADYEKGAMVDKALKAKIARVLYTNGMVAGAAKGSPHE*