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AMDSBA4_16_31

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(35162..35716)

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=12 to=23) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
Homeodomain-like (db=superfamily db_id=SSF46689 from=1 to=88 evalue=1.1e-15 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.10e-15
(db=HMMPfam db_id=PF00440 from=16 to=54 evalue=8.6e-14 interpro_id=IPR001647 interpro_description=DNA-binding HTH domain, TetR-type GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.60e-14

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Taxonomy

Deinococcus sp. RL → Deinococcus → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 555
ATGAGCCGCACCGCACGCATGCTCCCTGATCATCGGCGATTGGCAATCCTGGCCGTAGCCCGCGCCTTATTTTCGGAATATGGGCTGGAGAGCGTCTCCATGGGACAAATTGCCGAAGCCGCCGAAGTCTCTCGCCCCACCGTCTACCGGTATTTTGCGTCCCCCATGATGATTTGGGAAACGCTGTTCGAAGAGGAGGTGGCAGCCTTTTGGAATGCATGCCAACCCCTGCTTGCGGGACCCACCCCATCTGAAGGCATCCTCCACAAGGTTCTTCAACTCATTATTGCACACCCGACACTGCTTGCACTTCTTCATAGCGGGGGCAGCCGAACATTTCAGCTGCGGCGCCGACAAATGGTCGCCGAACGACTGTTGCCGCTGTTAAACCACTATATTCCGCCTAATCGTTTAGGCCCCTATGATAGCACCATTTTGCTGACGATTTTGGAAGGGACTGCGTGGTGGTGTGCCTTGGCAGAACCTCCTGATCCGGAAGTATTCGTTACTAACGTGGTGGACTGGATTCATGCTGTGTGGCCGGTATCCCCCTAA
PROTEIN sequence
Length: 185
MSRTARMLPDHRRLAILAVARALFSEYGLESVSMGQIAEAAEVSRPTVYRYFASPMMIWETLFEEEVAAFWNACQPLLAGPTPSEGILHKVLQLIIAHPTLLALLHSGGSRTFQLRRRQMVAERLLPLLNHYIPPNRLGPYDSTILLTILEGTAWWCALAEPPDPEVFVTNVVDWIHAVWPVSP*