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AMDSBA4_29_13

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(10588..11493)

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS605 OrfB n=3 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G463_9GAMM (db=UNIREF evalue=1.2e-70 bit_score=272.3 identity=48.9 coverage=89.0728476821192) similarity UNIREF
DB: UNIREF
  • Identity: 48.9
  • Coverage: 89.07
  • Bit_score: 272
  • Evalue 1.20e-70
seg (db=Seg db_id=seg from=238 to=255) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
(db=HMMPfam db_id=PF12323 from=1 to=32 evalue=4.4e-11 interpro_id=IPR021027 interpro_description=Transposase, putative, helix-turn-helix domain) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.40e-11

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Taxonomy

Thauera sp. 27 → Thauera → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGCTAAACGGGTATAAGTTTCGTCTGTATCCTCACGCCGAGCAGGAACGAATCTTGCTCCAGTGGATCGGGTGTCAACGCCTGATCTATAACGCCAAAGTCCAAGAGGACCGCTATTTTCGTCGATTTGCTCAATGCATGGTCGGCACGGCGGGAGAGAAAATTCCTGTCGATCAGGAGTATAGCCGCTTTATCACGGAGAAAACCGCCTTTCTTAAACAGGTGCCCTCGCAGATCTTGCGCAATGGGGCCGTCAAATTCAGACAAACCTATTCGCGCTTCTTTCAGAAGCTCGGAGGTCGTCCAAAAATCCAGAAGAAAAGCGGACGGCAGGCGGTCTGGATCACCGATGAGTTATTCCAATTCATCCCGCTAATCGATGAGACCAGCGAGATCGCATCGTATCAGTTGATCCGGGGCACGCAGAAGTTTCCGGTCGGGGCCCTTGCTTACGTGGCGCATCGGCCTCATGGCGTACCGTCTTCGATTCACGTCACCGTGGAAGGCGGCCACTGGTGGCTGTCCTTTGCCGCAGAGGATCCGGCAGTGACGATGCCCCAAAAGACAGTCGATGCGGCCACGGAGCAGATCGCCGAGGACTTGCGACATTTGTCGACGGAGCAACTTGCTGAGCGTACACTCGGCGGGGATCGCGGTGTGGCGAAGCCTTTGGTCACTTCCGACGGCAAGATTTACGATCTTGATCCCGTGCAAAAAGACCGCATCCAGCAGCATCGCAAACAACACAAGAAATGGCAACGACGGGCTTCTCGCAGGAAGAAAGGATCGAGAAATCAGAAGAAAGCCCATCAGAAAGCGGCACGGTATCAGCGGTACGAAAAGAACGTCCGGTCAACGAGGCCTATGATCCCTATGTGTTTGAGGATCTGCCCATTAAGAATATGA
PROTEIN sequence
Length: 302
MLNGYKFRLYPHAEQERILLQWIGCQRLIYNAKVQEDRYFRRFAQCMVGTAGEKIPVDQEYSRFITEKTAFLKQVPSQILRNGAVKFRQTYSRFFQKLGGRPKIQKKSGRQAVWITDELFQFIPLIDETSEIASYQLIRGTQKFPVGALAYVAHRPHGVPSSIHVTVEGGHWWLSFAAEDPAVTMPQKTVDAATEQIAEDLRHLSTEQLAERTLGGDRGVAKPLVTSDGKIYDLDPVQKDRIQQHRKQHKKWQRRASRRKKGSRNQKKAHQKAARYQRYEKNVRSTRPMIPMCLRICPLRI*