ggKbase home page

AMDSBA4_31_14

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(12467..13054)

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=62 to=77) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
ISP domain (db=superfamily db_id=SSF50022 from=4 to=170 evalue=7.9e-25 interpro_id=IPR017941 interpro_description=Rieske [2Fe-2S] iron-sulphur domain GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537), Biological Process: oxidation-reduction process (GO:0055114)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.90e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 588
ATGGCGGGCAAAAGGCCACAGCGGGCCGGCTGGACACGCCGAGATTTTTTCAACTGGGTCCTTAACGTAGTGATGGGTATTATTGCGATTTTAGTAGCGATCCCGGCTTTAGGCGTCGCTATCACCCCCGCATTTCAAAACCCCGCGCCAACCTGGGTTAATCTAGGAGCCGCAACCGGTTTGCAACAATCCTCGGTGCAGGCGGGCACTGGTGGGGTAGGGACAGTGGTTAAGGCGCCGTATTCCTATATTGAAGTGGATCATTGGGCCAAACTTCCGGCAGCGGATTATGCCTATCTACGTTATATAGGCGGATCCTGCCAGTTTTTTATTTTGTCTCCGATTTGCACCCACTTAGGCTGCCATGTGAACTGGATACAAGCCGACAACCAATTTCACTGTCCCTGCCACGGCAGCGTCTACACCATTGACGGACTTAATGTGTCTGGTCCTGCACCGTTGCCTTTGGGAGTCTTCCGCTGGAAAATGGTGGGACCCGACGTGTGGATAGCGCGGGAATCCACCTTTACTCATGCGCATCAGCGCATGGTAGAGGCCCCAGCACAACCGTGTCTTAAAGAAGCCTAA
PROTEIN sequence
Length: 196
MAGKRPQRAGWTRRDFFNWVLNVVMGIIAILVAIPALGVAITPAFQNPAPTWVNLGAATGLQQSSVQAGTGGVGTVVKAPYSYIEVDHWAKLPAADYAYLRYIGGSCQFFILSPICTHLGCHVNWIQADNQFHCPCHGSVYTIDGLNVSGPAPLPLGVFRWKMVGPDVWIARESTFTHAHQRMVEAPAQPCLKEA*