ggKbase home page

AMDSBA4_31_16

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(14250..14708)

Top 3 Functional Annotations

Value Algorithm Source
tRNA/rRNA methyltransferase SpoU similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 151.0
  • Bit_score: 230
  • Evalue 4.20e-58
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=Synechococcus RepID=Q2JPM3_SYNJB (db=UNIREF evalue=5.2e-38 bit_score=162.9 identity=57.7 coverage=94.11764705882352) similarity UNIREF
DB: UNIREF
  • Identity: 57.7
  • Coverage: 94.12
  • Bit_score: 162
  • Evalue 5.20e-38
Predicted S-adenosyl-L-methionine dependent tRNA/rRNA methyltransferase, SpoU type (db=HMMPIR db_id=PIRSF029256 from=1 to=151 evalue=1.0e-80 interpro_id=IPR016914 interpro_description=tRNA (cytidine/uridine-2'-O-)-methyltransferase GO=Molecular Function: methyltransferase activity (GO:0008168)) iprscan interpro
DB: HMMPIR
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.00e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 459
TTGCATGTGGTGTTAGTGGAGCCAGAGATTCCGCCTAACACCGGGAATATTGCTCGTACCTGCGCGGCAACCGAGACCACGCTGCACTTGATTGAGCCTTTGGGATTTTCGGTAAGCGATCGCTATTTACGGCGGGCTGGGGTAGACTATTGGCATCTGGTGGATGTGCGGATTCACAAATCTTGGGAAGCCTTTCCGGCGTCTCTAAAGTCCCCCCAGCATTTGCATTTGTTCACCTCTGGTGCCGACGCATCTTATATTGATACGGTATATGGGCCAGAGGACGTACTGATCTTTGGCCGTGAATCGGTCGGTTTGCCCAACTGGCTGTTAGACCAATATCCGGATCGACAGCGCAGGATTCCAATGCGCGGGCCGGTACGGTCACTAAATTTGTCTAATGCCGTAGCAATCGTTGTGTACGAGGCCTTAAGACAACAAGGATTTCCCGGTTGGTAG
PROTEIN sequence
Length: 153
LHVVLVEPEIPPNTGNIARTCAATETTLHLIEPLGFSVSDRYLRRAGVDYWHLVDVRIHKSWEAFPASLKSPQHLHLFTSGADASYIDTVYGPEDVLIFGRESVGLPNWLLDQYPDRQRRIPMRGPVRSLNLSNAVAIVVYEALRQQGFPGW*