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AMDSBA5_6_3

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: 1250..1603

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=98 to=113) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
HTH_ARSR_1 (db=PatternScan db_id=PS00846 from=40 to=58 evalue=0.0 interpro_id=IPR018334 interpro_description=Transcription regulator ArsR, conserved site GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=2 to=96 evalue=2.8e-18) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.80e-18

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Taxonomy

Brevibacterium linens → Brevibacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGAATCCGGTCATGATTTTTAAAGCGCTCGGTCATGAAACGCGATATCGGTTATTCTGTGATCTTTTTGGTACATCATCTTCCGCGTGTGAGATCAAAGATAATATTCCAGCCTGTTGTGTGATGGATTTGATGGAAAAATATCCATTGTCCCAATCTACCATTTCGCATCACTTAAAGATATTAGTCGAGGCCGAATTAGTGGAACAAGAAAACTACGGCACGTACCATTACTATCATGTCAATCTCGCGACCTGGAATGCTTTTCGTGATTACTTAAACCGTCTGAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGGCTTTAAATTTTTTTGA
PROTEIN sequence
Length: 118
MNPVMIFKALGHETRYRLFCDLFGTSSSACEIKDNIPACCVMDLMEKYPLSQSTISHHLKILVEAELVEQENYGTYHYYHVNLATWNAFRDYLNRLNXXXXXXXXXXXXXXGGFKFF*