ggKbase home page

AMDSBA5_17_36

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: comp(35946..36557)

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 162.0
  • Bit_score: 164
  • Evalue 3.80e-38
Lytic transglycosylase catalytic n=2 Tax=Spirochaeta thermophila RepID=G0GD42_9SPIO (db=UNIREF evalue=6.8e-17 bit_score=93.2 identity=34.7 coverage=77.94117647058823) similarity UNIREF
DB: UNIREF
  • Identity: 34.7
  • Coverage: 77.94
  • Bit_score: 93
  • Evalue 6.80e-17
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 612
ATGGCGCAACGCAAACGCTACCGTCTAAAGGCGGGCCGCGCAGGAGTTTTTTGGATCAGCTTTATACTATTGGTTCTTATTATGTTGTACCGCTATGTGGCACCCATGCCCTACCGAGCTGTGATTTGGCATGAAGCCCAAGTGAACCATCTCAGTCCCTATTTGGTGGCTGCTGTGATTCGGGTGGAAAGTAGTTACCGGCCCAATGCCGTGAGCAGTAAAGGGGCGATTGGCCTCATGCAACTCATCCCTTCGACGGCAAAGTGGGCCAGTTTAAAGGCGGACAATCGAAGGATTCAGACCGCCGAATTATTTGATCCGGCACTGAACATCCACCTGGGGACGTGGTATTTAAATCAACTTTTGCAAAGTTATGCGGGTAATGAAGTGTTGGGCCTAGCGGCTTATAATGCAGGTTCGCGCAATGTGCGCAACTGGTTAAGCGAAGGATTATTAACCCCGTCGGCCACTTCGGCCCAAAAGATTCCGTTTCCTGAAACAAAACATTTTGTCCACCGCGTACTGTTCTATAAGGTCCTTTATCATTCCCTCTACGGATTTTTTCCACCGCCATCTCGGCATTCGTCGTTATGGCAGGCCTTGTTACCATAA
PROTEIN sequence
Length: 204
MAQRKRYRLKAGRAGVFWISFILLVLIMLYRYVAPMPYRAVIWHEAQVNHLSPYLVAAVIRVESSYRPNAVSSKGAIGLMQLIPSTAKWASLKADNRRIQTAELFDPALNIHLGTWYLNQLLQSYAGNEVLGLAAYNAGSRNVRNWLSEGLLTPSATSAQKIPFPETKHFVHRVLFYKVLYHSLYGFFPPPSRHSSLWQALLP*