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AMDSBAU_3

Alias: SULFO_OTHER_3

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Displaying items 31-60 of 63 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBAU_3_31
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23871..24236)
DNA (366bp) protein (122aa)
Transposase IS66 {ECO:0000313|EMBL:EST55377.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
IS66 Orf2 family protein
IS66 Orf2 family protein n=6 Tax=Alicyclobacillus RepID=F8ICR8_ALIAT (db=UNIREF evalue=4.3e-39 bit_score=166.4 identity=67.5 coverage=91.80327868852459)
(db=HMMPfam db_id=PF05717 from=10 to=113 evalue=5.0e-40 interpro_id=IPR008878 interpro_description=Transposase IS66, Orf2)
AMDSBAU_3_32
unknown

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comp(24233..24541)
DNA (309bp) protein (103aa)
24233..24541 - ( gc_cont=0.631)
AMDSBAU_3_33
unknown

Not on your lists

comp(24683..24883)
DNA (201bp) protein (67aa)
seg (db=Seg db_id=seg from=25 to=38)
AMDSBAU_3_34
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25693..28293
DNA (2601bp) protein (867aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=53633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Famil
Phosphoenolpyruvate carboxylase n=3 Tax=Sulfobacillus acidophilus RepID=A1Z6B8_9FIRM (db=UNIREF evalue=2.5e-261 bit_score=907.5 identity=53.8 coverage=98.84659746251442)
ppc; phosphoenolpyruvate carboxylase rbh
ppc; phosphoenolpyruvate carboxylase rbh
AMDSBAU_3_35
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28585..29406
DNA (822bp) protein (274aa)
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:AEJ38587.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus ac
Rubrerythrin n=2 Tax=Sulfobacillus acidophilus RepID=F8I6A7_SULAT (db=UNIREF evalue=8.3e-46 bit_score=189.9 identity=40.9 coverage=93.43065693430657)
(db=HMMPfam db_id=PF00210 from=10 to=133 evalue=1.2e-10 interpro_id=IPR008331 interpro_description=Ferritin/DPS protein domain GO=Biological Process: cellular iron ion homeostasis (GO:0006879), Molecular Function: ferric iron binding (GO:0008199))
AMDSBAU_3_36
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29440..30312)
DNA (873bp) protein (291aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000313|EMBL:EMA71091.1}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rul
UDP-diphosphatase
Undecaprenyl-diphosphatase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M9S2_CALMQ (db=UNIREF evalue=5.9e-34 bit_score=150.6 identity=31.1 coverage=94.84536082474226)
transmembrane_regions (db=TMHMM db_id=tmhmm from=270 to=289)
AMDSBAU_3_37
Pseudomonas sp. UW4, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30708..31205)
DNA (498bp) protein (166aa)
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AFY19309.1}; TaxID=1207075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
3-oxoacyl-[acyl-carrier protein] reductase n=8 Tax=Burkholderia RepID=A9AP80_BURM1
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=1 to=160 evalue=1.1e-41 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
AMDSBAU_3_38
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31384..32436)
DNA (1053bp) protein (351aa)
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EJY55762.1}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyc
Mandelate racemase/muconate lactonizing protein n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HBB0_9BACL (db=UNIREF evalue=1.5e-148 bit_score=531.6 identity=71.8 coverage=98.86039886039886)
galactonate dehydratase (EC:4.2.1.6)
MR_MLE_2 (db=PatternScan db_id=PS00909 from=148 to=179 evalue=0.0 interpro_id=IPR018110 interpro_description=Mandelate racemase/muconate lactonizing enzyme, conserved site GO=Biological Process: cellular amino acid catabolic process (GO:0009063))
AMDSBAU_3_39
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(32384..32773)
DNA (390bp) protein (130aa)
Mandelate racemase/muconate lactonizing family protein {ECO:0000313|EMBL:EJN57542.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum s
Mandelate racemase/muconate lactonizing family protein n=1 Tax=Halogranum salarium B-1 RepID=J3ETM9_9EURY (db=UNIREF evalue=1.5e-08 bit_score=65.1 identity=77.8 coverage=26.923076923076923)
hypothetical protein
AMDSBAU_3_40
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33347..34939
DNA (1593bp) protein (531aa)
malate synthase A (EC:2.3.3.9)
malate synthase A (EC:2.3.3.9)
Malate synthase n=2 Tax=Thermaerobacter RepID=E6SML9_THEM7
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae
AMDSBAU_3_41
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35008..35796
DNA (789bp) protein (263aa)
IclR family transcriptional regulator
IclR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AEW03796.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
IclR family transcriptional regulator n=2 Tax=Sulfobacillus acidophilus RepID=F8I512_SULAT
AMDSBAU_3_42
unknown

Not on your lists

35738..36073
DNA (336bp) protein (112aa)
35738..36073 + ( gc_cont=0.533)
AMDSBAU_3_43
unknown

Not on your lists

comp(36103..36252)
DNA (150bp) protein (50aa)
36103..36252 - ( gc_cont=0.600)
AMDSBAU_3_44
Thermus scotoductus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(36672..37562)
DNA (891bp) protein (297aa)
gsiD4; glutathione transport system permease GsiD
Glutathione transport system permease protein GsiD {ECO:0000313|EMBL:ADW21821.1}; TaxID=743525 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sco
Glutathione transport system permease protein GsiD n=1 Tax=Thermus scotoductus SA-01 RepID=E8PQN9_THESS (db=UNIREF evalue=2.9e-73 bit_score=281.2 identity=53.2 coverage=91.91919191919192)
transmembrane_regions (db=TMHMM db_id=tmhmm from=259 to=281)
AMDSBAU_3_45
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37580..38533)
DNA (954bp) protein (318aa)
Diguanylate cyclase {ECO:0000313|EMBL:KGM32333.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus M
Oligopeptide ABC transporter (Permease) n=3 Tax=Bacillus RepID=Q65LC9_BACLD (db=UNIREF evalue=4.6e-72 bit_score=277.3 identity=43.2 coverage=99.05660377358491)
appB1; oligopeptide ABC transporter permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=288 to=310)
AMDSBAU_3_46

Not on your lists

comp(38591..40252)
DNA (1662bp) protein (554aa)
Putative Extracellular solute-binding protein,family 5 {ECO:0000313|EMBL:CBI02240.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagen
Putative Extracellular solute-binding protein, family 5 n=2 Tax=mine drainage metagenome RepID=E6PG59_9ZZZZ (db=UNIREF evalue=2.8e-69 bit_score=268.9 identity=30.7 coverage=96.75090252707581)
ABC-type transporter, periplasmic subunit
seg (db=Seg db_id=seg from=6 to=19)
AMDSBAU_3_47
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(40313..41551)
DNA (1239bp) protein (413aa)
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:KFN10675.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Pa
sarcosine oxidase subunit alpha
Thioredoxin reductase n=1 Tax=Brevibacillus sp. CF112 RepID=J3AVK6_9BACL (db=UNIREF evalue=1.2e-51 bit_score=209.9 identity=33.7 coverage=93.22033898305084)
seg (db=Seg db_id=seg from=13 to=26)
AMDSBAU_3_48
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(41804..42940)
DNA (1137bp) protein (379aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM38334.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
FAD dependent oxidoreductase
FAD dependent oxidoreductase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6L7_SPHTD (db=UNIREF evalue=1.5e-69 bit_score=269.2 identity=41.8 coverage=95.77836411609498)
seg (db=Seg db_id=seg from=4 to=17)
AMDSBAU_3_49
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42942..43292)
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:EYT81314.1}; Flags: Fragment;; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp.
trxB4; thioredoxin reductase
Thioredoxin reductase n=1 Tax=Streptomyces bingchenggensis BCW-1 RepID=D7C6P9_STRBB (db=UNIREF evalue=5.0e-08 bit_score=63.2 identity=38.5 coverage=69.23076923076923)
seg (db=Seg db_id=seg from=26 to=37)
AMDSBAU_3_50
Bacillus coagulans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(43323..44396)
DNA (1074bp) protein (358aa)
sarcosine oxidase subunit beta n=1 Tax=Lentibacillus sp. Grbi RepID=UPI0002628456 (db=UNIREF evalue=1.0e-75 bit_score=289.7 identity=43.8 coverage=97.48603351955308)
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEP01495.1}; TaxID=345219 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus coagulans 36D1.;"
no description (db=Gene3D db_id=G3DSA:3.50.50.60 from=5 to=347 evalue=1.9e-36)
AMDSBAU_3_51
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44419..44703)
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:EDM73295.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. Az
Putative uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FLM7_9RHOB (db=UNIREF evalue=1.0e-11 bit_score=75.1 identity=44.0 coverage=92.63157894736842)
BFD (2Fe-2S)-binding domain-containing protein
seg (db=Seg db_id=seg from=65 to=75)
AMDSBAU_3_52

Not on your lists

comp(44703..45755)
DNA (1053bp) protein (351aa)
Marine sediment metagenome DNA, contig: S01H1_L05165 {ECO:0000313|EMBL:GAF76634.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Sarcosine oxidase, subunit alpha n=1 Tax=uncultured organism RepID=M1Q2U1_9ZZZZ
hypothetical protein
2FE2S_FER_1 (db=PatternScan db_id=PS00197 from=48 to=56 evalue=0.0 interpro_id=IPR006058 interpro_description=2Fe-2S ferredoxin, iron-sulphur binding site GO=Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537))
AMDSBAU_3_53
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(45745..46461)
DNA (717bp) protein (239aa)
transcriptional regulator Tax=CSP1_3_Armatimonadetes
transcription regulator protein
Transcription regulator protein n=3 Tax=Herbaspirillum RepID=D8J214_HERSS
SUBGROUP I AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751 from=15 to=65 evalue=0.00035)
AMDSBAU_3_54
Streptomyces flaveolus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47187..49844
DNA (2658bp) protein (886aa)
MycH5 {ECO:0000313|EMBL:AFG19435.1}; TaxID=67297 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces flaveolus.;"
MycH5 n=1 Tax=Streptomyces flaveolus RepID=H9TEB4_9ACTO (db=UNIREF evalue=6.2e-34 bit_score=152.1 identity=27.9 coverage=53.72460496613996)
seg (db=Seg db_id=seg from=27 to=40)
seg (db=Seg db_id=seg from=604 to=616)
AMDSBAU_3_55
unknown

Not on your lists

comp(50096..50311)
DNA (216bp) protein (72aa)
50096..50311 - ( gc_cont=0.569)
AMDSBAU_3_56
unknown

Not on your lists

comp(50694..51074)
DNA (381bp) protein (127aa)
50694..51074 - ( gc_cont=0.549)
AMDSBAU_3_57
unknown

Not on your lists

comp(51019..51234)
DNA (216bp) protein (72aa)
seg (db=Seg db_id=seg from=35 to=46)
AMDSBAU_3_58
Paenibacillus sp. IHBB 10380, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

51370..52143
DNA (774bp) protein (258aa)
transposase
Transposase {ECO:0000313|EMBL:AJS61543.1}; TaxID=1566358 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. IHBB 10380.;"
Transposase IS4 family protein n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SPH0_9BACL (db=UNIREF evalue=4.7e-59 bit_score=233.8 identity=57.9 coverage=75.5813953488372)
(db=HMMPfam db_id=PF05598 from=96 to=164 evalue=8.9e-20 interpro_id=IPR008490 interpro_description=Transposase InsH, N-terminal)
AMDSBAU_3_59
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52234..53457)
DNA (1224bp) protein (408aa)
RNA-directed DNA polymerase rbh
RNA-directed DNA polymerase rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW06474.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
RNA-directed DNA polymerase (Reverse transcriptase) n=3 Tax=Sulfobacillus RepID=G8U0D2_SULAD
AMDSBAU_3_60
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(53981..55312)
DNA (1332bp) protein (444aa)
RNA-directed DNA polymerase Tax=GWF2_Planctomycetes_42_9_curated
RNA-directed DNA polymerase
RNA-directed DNA polymerase
RNA-directed DNA polymerase (Reverse transcriptase) n=2 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AU52_SYNWW
Displaying items 31-60 of 63 in total

View Taxonomy