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AMDSBA2_164

Alias: SULFO_6_164

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA2_164_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35..430)
-----------------
DNA (396bp)
protein (132aa)
general substrate transporter
Sugar transporter {ECO:0000313|EMBL:AEJ39106.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacill
Sugar transporter n=2 Tax=Sulfobacillus acidophilus RepID=F8IAJ1_SULAT (db=UNIREF evalue=6.0e-34 bit_score=149.4 identity=62.7 coverage=94.6969696969697)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
AMDSBA2_164_2
unknown

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440..787
-----------------
DNA (348bp)
protein (116aa)
440..787 + ( gc_cont=0.457)
AMDSBA2_164_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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816..1142
-----------------
DNA (327bp)
protein (109aa)
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus ac
Thioredoxin n=2 Tax=Sulfobacillus acidophilus RepID=G8TY81_SULAD (db=UNIREF evalue=7.1e-25 bit_score=119.0 identity=50.0 coverage=96.3302752293578)
thioredoxin: thioredoxin (db=HMMTigr db_id=TIGR01068 from=8 to=108 evalue=1.7e-40 interpro_id=IPR005746 interpro_description=Thioredoxin GO=Biological Process: glycerol ether metabolic process (GO:0006662), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: protein disulfide oxidoreductase activity (GO:0015035), Biological Process: cell redox homeostasis (GO:0045454))
AMDSBA2_164_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1198..2865)
-----------------
DNA (1668bp)
protein (556aa)
Superfamily I DNA/RNA helicase n=1 Tax=Niastella koreensis GR20-10 RepID=G8TN14_NIAKG (db=UNIREF evalue=1.0e-10 bit_score=74.3 identity=22.7 coverage=58.45323741007194)
(db=HMMPfam db_id=PF04851 from=7 to=56 evalue=0.00017 interpro_id=IPR006935 interpro_description=Helicase/UvrB domain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Molecular Function: hydrolase activity (GO:0016787))
no description (db=HMMSmart db_id=SM00382 from=18 to=272 evalue=0.0043 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=482 evalue=1.7e-14)
AMDSBA2_164_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3418..3882
-----------------
DNA (465bp)
protein (155aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ41700.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWG7_SULAD
seg (db=Seg db_id=seg from=71 to=81)
AMDSBA2_164_6
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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4554..5750
-----------------
DNA (1197bp)
protein (399aa)
rtcB; rtcB protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
rtcB; rtcB protein
rtcB; rtcB protein
RtcB protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K1J2_AZOSB
AMDSBA2_164_7
unknown

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6166..6339
-----------------
DNA (174bp)
protein (58aa)
seg (db=Seg db_id=seg from=17 to=29)
Displaying 7 items

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