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AMDSBA2_174_6

Organism: S._sp._IM6

near complete RP 49 / 55 MC: 13 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: comp(5928..6215)

Top 3 Functional Annotations

Value Algorithm Source
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=30 to=95 evalue=0.00058 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 5.80e-04
(db=HMMPfam db_id=PF01047 from=36 to=86 evalue=2.8e-07 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 2.00e+00
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=95 evalue=4.5e-11) iprscan interpro
DB: superfamily
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 4.00e+00

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Taxonomy

Sequences

DNA sequence
Length: 288
TTGGAACTTGCGCAGCTTTATTATGTGGCTCGCCGATTGCGTACGTGGCTGGAAGCTCGTGTAGTTTCTCCGGAGGCATCCTACGTGTTGCCTTTGTATGAGAGGGTGGTCATGCGAGAAATCGTAGAAAACCCCGGGCAAAGTATCCAAGAGGTAGCTCGAACTTTAGGATTACCGCAAAGCATGGTATCCAAGGCCGTTAAGCATTGCAGTGAACAAGAGTGGCTCTATCGCGTTCCAGATTCTCGAGACCGGCGTCTGTCGCGTCTCGCACCATCTGCGGAATGA
PROTEIN sequence
Length: 96
LELAQLYYVARRLRTWLEARVVSPEASYVLPLYERVVMREIVENPGQSIQEVARTLGLPQSMVSKAVKHCSEQEWLYRVPDSRDRRLSRLAPSAE*