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Candidatus_Parvarchaeum_acidophilus_ARMAN-5_baker2010

amd_refseq_Candidatus_Parvarchaeum_acidophilus_35_1

In projects: amd_refseq | AMD_2019 | alphabet_plasma | archaea_ggkbase

Consensus taxonomy: Candidatus Parvarchaeum acidophilus → Candidatus Parvarchaeum → Parvarchaeota → Archaea

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 67.59 Kbp Bin length: 920.27 Kbp GC content: 34.89 %

Contigs count: 73 Features count: 1086 rRNAs count: 0 tRNAs count: 39

Genome completeness

near complete RP 31 / 55 BSCG 16 / 51 MC: 2 ASCG 34 / 38 MC: 5

Description

Candidatus Parvarchaeum acidophilus ARMAN-5 genomic scaffold Scf_ARM5contig_4776, whole genome shotgun sequence

Displaying items 51-73 of 73 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
GG745578	5	4626 bp	31.43	1.00	0.00
GG745582	5	5869 bp	37.83	1.00	0.00
GG745585	5	4617 bp	32.73	1.00	0.00
GG745567	4	2633 bp	31.83	1.00	0.00
GG745616	4	3619 bp	36.50	1.00	0.00
GG745575	4	4520 bp	33.98	1.00	0.00
GG745577	4	2522 bp	36.32	1.00	0.00
GG745587	4	4813 bp	33.89	1.00	0.00
GG745562	3	1385 bp	35.74	1.00	0.00
GG745564	3	1621 bp	38.19	1.00	0.00
GG745566	3	1715 bp	30.55	1.00	0.00
GG745570	3	2593 bp	36.37	1.00	0.00
GG745568	3	1998 bp	32.28	1.00	0.00
GG745569	3	3238 bp	34.06	1.00	0.00
GG745560	2	1319 bp	36.39	1.00	0.00
GG745565	2	1941 bp	35.34	1.00	0.00
GG745572	2	1570 bp	37.64	1.00	0.00
GG745571	2	1913 bp	36.28	1.00	0.00
GG745576	2	3407 bp	31.88	1.00	0.00
GG745580	2	2686 bp	33.99	1.00	0.00
GG745561	1	1112 bp	32.73	1.00	0.00
GG745563	1	1847 bp	35.19	1.00	0.00
GG745590	1	5602 bp	39.63	1.00	0.00

Displaying items 51-73 of 73 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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