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anamox1_curated_scaffold_211

Search features with annotation key words

Displaying items 31-60 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_211_30
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39512..40726)
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT18_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96155.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_211_31
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40737..42425
DNA (1689bp) protein (563aa)
nadE; NAD synthetase NadE (EC:6.3.5.1)
NH(3)-dependent NAD(+) synthetase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVW8_9BURK
NH(3)-dependent NAD(+) synthetase {ECO:0000313|EMBL:EGJ12486.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_211_32
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42461..42799
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVW7_9BURK
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EGJ12485.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
glnB; nitrogen regulatory protein P-II GlnB
anamox1_curated_scaffold_211_33
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42818..43408)
DNA (591bp) protein (197aa)
LOG family protein PA4923 Tax=Ideonella sp. B508-1 RepID=UPI00034B483F
LOG family protein YvdD {ECO:0000313|EMBL:EWS60605.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein
anamox1_curated_scaffold_211_34
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43405..43785)
DNA (381bp) protein (127aa)
dgkA; diacylglycerol kinase DgkA (EC:2.7.1.107)
Diacylglycerol kinase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKB0_9BURK
Diacylglycerol kinase {ECO:0000313|EMBL:EHR71826.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_211_35
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43889..44416)
DNA (528bp) protein (176aa)
Putative membrane protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKA9_9BURK
Putative membrane protein {ECO:0000313|EMBL:EHR71825.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_211_36
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44413..45228)
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVW3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12481.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_211_37
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45225..45677)
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT11_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96148.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_211_38
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45674..46312)
DNA (639bp) protein (213aa)
Putative RNA polymerase sigma factor transcription regulator protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVW1_9BURK
Putative RNA polymerase sigma factor transcription regulator protein {ECO:0000313|EMBL:EGJ12479.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ECF subfamily RNA polymerase sigma-70 factor
anamox1_curated_scaffold_211_39
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46517..48289
DNA (1773bp) protein (591aa)
ilvI; acetolactate synthase large subunit IlvI/IlvB (EC:2.2.1.6)
Acetolactate synthase large subunit IlvI/IlvB {ECO:0000313|EMBL:BAL96146.1}; EC=2.2.1.6 {ECO:0000313|EMBL:BAL96146.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Acetolactate synthase large subunit IlvI/IlvB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT09_RUBGI
anamox1_curated_scaffold_211_40
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48478..48969
DNA (492bp) protein (164aa)
ilvH; acetolactate synthase small subunit IlvH (EC:2.2.1.6)
Acetolactate synthase, small subunit Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKA4_9BURK
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EHR71820.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_211_41
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49017..50033
DNA (1017bp) protein (339aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000255|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000255|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Ketol-acid reductoisomerase Tax=Methylibium petroleiphilum (strain PM1) RepID=ILVC_METPP
anamox1_curated_scaffold_211_42
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50090..51175
DNA (1086bp) protein (362aa)
Glycerophosphoryl diester phosphodiesterase Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12DI0_POLSJ
glycerophosphoryl diester phosphodiesterase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
anamox1_curated_scaffold_211_43
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51208..52173)
DNA (966bp) protein (322aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQ53_ACCPU
hypothetical protein
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ACV35639.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
anamox1_curated_scaffold_211_44
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52427..53257
DNA (831bp) protein (277aa)
pssA; phosphatidylserine synthase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVV7_9BURK
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:EGJ12475.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_211_45
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53518..55059
DNA (1542bp) protein (514aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; EC=2.3.3.13 {ECO:0000255|HAMAP-Rule:MF_01025};; Alpha-IPM synthase {ECO:0000255|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
2-isopropylmalate synthase Tax=Methylibium petroleiphilum (strain PM1) RepID=LEU1_METPP
anamox1_curated_scaffold_211_46
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55156..56196
DNA (1041bp) protein (347aa)
pbpG; D-alanyl-D-alanine endopeptidase, PbpG (EC:3.4.16.4)
D-alanyl-D-alanine endopeptidase, PbpG {ECO:0000313|EMBL:BAL96141.1}; EC=3.4.16.4 {ECO:0000313|EMBL:BAL96141.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
D-alanyl-D-alanine endopeptidase, PbpG Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT04_RUBGI
anamox1_curated_scaffold_211_47
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56211..56981)
DNA (771bp) protein (257aa)
Transcriptional regulator, IclR family Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HT03_RUBGI
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:BAL96140.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_211_48
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56978..58306)
DNA (1329bp) protein (443aa)
Squalene-associated FAD-dependent desaturase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6H9_LEPCP
squalene-associated FAD-dependent desaturase
Squalene-associated FAD-dependent desaturase {ECO:0000313|EMBL:ACB34815.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_211_49
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58303..59151)
DNA (849bp) protein (283aa)
squalene/phytoene synthase (EC:2.5.1.32)
Squalene synthase HpnD Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIJ2_9BURK
Squalene synthase HpnD {ECO:0000313|EMBL:EHR71812.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_211_50
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59148..59984)
DNA (837bp) protein (279aa)
squalene/phytoene synthase (EC:2.5.1.32)
Putative terpenoid synthase-like protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVV1_9BURK
Putative terpenoid synthase-like protein {ECO:0000313|EMBL:EGJ12469.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_211_trna_2
unknown

Not on your lists

60107..60196
DNA (90bp)
transferRNA Leu
anamox1_curated_scaffold_211_51
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60220..61530
DNA (1311bp) protein (437aa)
trigger factor Tax=Ideonella sp. B508-1 RepID=UPI00034BB842
tig; trigger factor
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_211_52
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61583..62191
DNA (609bp) protein (203aa)
clpP; ATP-dependent Clp protease, protease subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
ATP-dependent Clp protease proteolytic subunit Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HSZ6_RUBGI
anamox1_curated_scaffold_211_53
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62342..63613
DNA (1272bp) protein (424aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVU6_9BURK
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
anamox1_curated_scaffold_211_54
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63722..66148
DNA (2427bp) protein (809aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
lon; ATP-dependent protease La, Lon (EC:3.4.21.53)
Lon protease Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVU5_9BURK
anamox1_curated_scaffold_211_trna_3
unknown

Not on your lists

66260..66332
DNA (73bp)
transferRNA Gly
anamox1_curated_scaffold_211_trna_4
unknown

Not on your lists

66396..66466
DNA (71bp)
transferRNA Cys
anamox1_curated_scaffold_211_trna_5
unknown

Not on your lists

66579..66664
DNA (86bp)
transferRNA Leu
anamox1_curated_scaffold_211_55
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66690..68000
DNA (1311bp) protein (437aa)
Major facilitator superfamily permease Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WII4_9BURK
Major facilitator superfamily permease {ECO:0000313|EMBL:EHR71804.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
integral membrane protein
Displaying items 31-60 of 134 in total

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