ggKbase | organisms

Consensus taxonomy: Planctomycetia → Planctomycetes → Bacteria

Metagenomic Context

Parent: anamox1_Planctomycetia_64_8 Manually curated genome
Original version: anamox1_Planctomycetia_64_8

Properties

Avg. coverage: 1.00 Longest contig: 35.63 Kbp Bin length: 4.14 Mbp GC content: 63.58 %

Contigs count: 783 Features count: 3420 rRNAs count: 0 tRNAs count: 20

Genome completeness

near complete RP 45 / 55 MC: 3 BSCG 43 / 51 MC: 2 ASCG 10 / 38 MC: 1

Displaying items 151-200 of 783 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
anamox1_curated_scaffold_31410 Species: RBG_13_Planctomycetes_63_9_curated (50%)	2	1905 bp	63.15	1.00	81.89
anamox1_curated_scaffold_47951 Species: RBG_16_Planctomycetes_64_10_curated (50%)	2	1411 bp	62.30	1.00	85.68
anamox1_curated_scaffold_18121 Species: marine sediment metagenome (50%)	2	2628 bp	58.37	1.00	14.50
anamox1_curated_scaffold_12959 Species: Pirellula staleyi (50%)	2	3126 bp	63.44	1.00	70.25
anamox1_curated_scaffold_80195 Species: Pirellula staleyi (100%)	2	1081 bp	66.79	1.00	94.63
anamox1_curated_scaffold_48957 Species: RBG_16_Planctomycetes_64_10_curated (100%)	2	1702 bp	65.16	1.00	71.39
anamox1_curated_scaffold_29512 Species: Pirellula staleyi (100%)	2	1779 bp	63.24	1.00	89.04
anamox1_curated_scaffold_12665 Species: Gimesia maris (50%)	2	3832 bp	63.23	1.00	70.54
anamox1_curated_scaffold_18839 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	2365 bp	64.10	1.00	84.86
anamox1_curated_scaffold_15449 Species: Pirellula staleyi (50%)	2	2951 bp	60.89	1.00	53.68
anamox1_curated_scaffold_20028 Species: Pirellula staleyi (100%)	2	2601 bp	64.44	1.00	100.12
anamox1_curated_scaffold_48280 Species: Gimesia maris (50%)	2	1210 bp	62.98	1.00	85.29
anamox1_curated_scaffold_60132 Species: Pirellula staleyi (50%)	2	1184 bp	63.26	1.00	86.15
anamox1_curated_scaffold_35352 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1974 bp	64.69	1.00	77.05
anamox1_curated_scaffold_38317 Species: Pirellula staleyi (100%)	2	1761 bp	66.16	1.00	100.17
anamox1_curated_scaffold_12332 Species: Pirellula staleyi (100%)	2	3810 bp	65.67	1.00	68.58
anamox1_curated_scaffold_9458 Species: Singulisphaera acidiphila (50%)	2	4237 bp	59.10	1.00	76.26
anamox1_curated_scaffold_32999 Species: Pirellula staleyi (50%)	2	1421 bp	64.74	1.00	55.52
anamox1_curated_scaffold_33799 Species: Methylococcus capsulatus (50%)	2	1646 bp	63.49	1.00	99.33
anamox1_curated_scaffold_45217 Species: Pirellula staleyi (50%)	2	1507 bp	62.11	1.00	65.69
anamox1_curated_scaffold_13736 Species: Anaeromyxobacter sp. Fw109-5 (50%)	2	3819 bp	67.01	1.00	95.37
anamox1_curated_scaffold_23026 Species: Singulisphaera acidiphila (50%)	2	2269 bp	57.56	1.00	55.40
anamox1_curated_scaffold_46943 Species: Singulisphaera acidiphila (50%)	2	1236 bp	62.54	1.00	86.41
anamox1_curated_scaffold_26755 Species: Rhodopirellula sallentina (50%)	2	1926 bp	65.42	1.00	92.99
anamox1_curated_scaffold_53209 Species: RBG_16_Planctomycetes_64_10_curated (50%)	2	2280 bp	63.73	1.00	59.74
anamox1_curated_scaffold_28869 Species: Pirellula staleyi (50%)	2	2335 bp	62.61	1.00	47.02
anamox1_curated_scaffold_15473 Species: Pirellula staleyi (50%)	2	3141 bp	65.90	1.00	50.43
anamox1_curated_scaffold_37846 Species: Rhodopirellula sp. SWK7 (50%)	2	1756 bp	56.89	1.00	57.57
anamox1_curated_scaffold_33877 Species: Blastopirellula marina (100%)	2	1985 bp	67.61	1.00	88.72
anamox1_curated_scaffold_40517 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1594 bp	62.67	1.00	50.44
anamox1_curated_scaffold_18486 Species: RBG_13_Planctomycetes_63_9_curated (50%)	2	2539 bp	64.95	1.00	73.14
anamox1_curated_scaffold_18790 Species: Blastopirellula marina (50%)	2	2612 bp	63.90	1.00	79.94
anamox1_curated_scaffold_7970 Species: Thiocapsa marina (50%)	2	5288 bp	61.52	1.00	73.24
anamox1_curated_scaffold_52543 Species: Pirellula staleyi (50%)	2	1203 bp	63.34	1.00	77.56
anamox1_curated_scaffold_23448 Species: Pirellula staleyi (50%)	2	2364 bp	62.90	1.00	81.47
anamox1_curated_scaffold_29214 Species: Rhodopirellula baltica (50%)	2	1742 bp	56.26	1.00	45.64
anamox1_curated_scaffold_11991 Species: RBG_13_Planctomycetes_63_9_curated (50%)	2	3643 bp	61.52	1.00	82.60
anamox1_curated_scaffold_28538 Species: Pirellula staleyi (50%)	2	1609 bp	60.66	1.00	52.77
anamox1_curated_scaffold_32679 Species: Blastopirellula marina (50%)	2	1876 bp	64.29	1.00	78.52
anamox1_curated_scaffold_16783 Species: RBG_16_Planctomycetes_64_10_curated (50%)	2	3369 bp	61.74	1.00	70.35
anamox1_curated_scaffold_83331 Species: Rhodopirellula baltica (100%)	2	1366 bp	61.71	1.00	96.19
anamox1_curated_scaffold_24560 Species: Planctopirus limnophila (50%)	2	2058 bp	61.08	1.00	92.13
anamox1_curated_scaffold_12085 Species: RBG_13_Planctomycetes_63_9_curated (50%)	2	3601 bp	65.70	1.00	87.73
anamox1_curated_scaffold_24222 Species: RBG_13_Planctomycetes_63_9_curated (50%)	2	2586 bp	62.80	1.00	49.07
anamox1_curated_scaffold_28952 Species: Planctopirus limnophila (50%)	2	1634 bp	62.06	1.00	95.84
anamox1_curated_scaffold_33180 Species: Pirellula staleyi (100%)	2	1626 bp	62.73	1.00	68.82
anamox1_curated_scaffold_36982 Species: Pirellula staleyi (50%)	2	1855 bp	63.61	1.00	67.60
anamox1_curated_scaffold_40818 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1412 bp	65.58	1.00	52.27
anamox1_curated_scaffold_31575 Species: Blastopirellula marina (50%)	2	1948 bp	56.57	1.00	61.60
anamox1_curated_scaffold_21341 Species: Pirellula staleyi (50%)	2	2010 bp	60.65	1.00	75.67

Displaying items 151-200 of 783 in total

anamox1_Planctomycetia_64_8_curated

anamox1_Planctomycetia_64_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

anamox1_Planctomycetia_64_8_curated

anamox1_Planctomycetia_64_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

Terms of Service

Search Help