ggKbase | organisms

Consensus taxonomy: Truepera radiovictrix → Truepera → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Metagenomic Context

Parent: anamox1_Truepera_radiovictrix_71_5 Manually curated genome
Original version: anamox1_Truepera_radiovictrix_71_5

Properties

Avg. coverage: 1.00 Longest contig: 3.40 Kbp Bin length: 435.66 Kbp GC content: 69.12 %

Contigs count: 317 Features count: 694 rRNAs count: 0 tRNAs count: 3

Genome completeness

partial RP 22 / 55 MC: 2 BSCG 22 / 51 MC: 1 ASCG 4 / 38

Displaying items 151-200 of 317 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
anamox1_curated_scaffold_51307 Species: Truepera radiovictrix (50%)	2	1154 bp	70.02	1.00	68.37
anamox1_curated_scaffold_51645 Species: Truepera radiovictrix (50%)	2	1148 bp	66.99	1.00	88.33
anamox1_curated_scaffold_51832 Species: Acetonema longum (50%)	2	627 bp	66.51	1.00	88.52
anamox1_curated_scaffold_37201 Species: Truepera radiovictrix (100%)	2	1712 bp	66.94	1.00	79.03
anamox1_curated_scaffold_37396 Species: Truepera radiovictrix (100%)	2	1447 bp	75.05	1.00	100.97
anamox1_curated_scaffold_37893 Species: Truepera radiovictrix (50%)	2	1489 bp	68.77	1.00	79.99
anamox1_curated_scaffold_39214 Species: Truepera radiovictrix (50%)	2	1405 bp	69.68	1.00	80.93
anamox1_curated_scaffold_39318 Species: Truepera radiovictrix (50%)	2	1450 bp	72.41	1.00	83.17
anamox1_curated_scaffold_39573 Species: Truepera radiovictrix (100%)	2	1413 bp	73.39	1.00	94.69
anamox1_curated_scaffold_39723 Species: Truepera radiovictrix (50%)	2	1202 bp	46.26	1.00	21.71
anamox1_curated_scaffold_39812 Species: Truepera radiovictrix (50%)	2	1364 bp	74.19	1.00	86.00
anamox1_curated_scaffold_52169 Species: Truepera radiovictrix (100%)	2	1140 bp	73.51	1.00	99.47
anamox1_curated_scaffold_52373	2	995 bp	68.84	1.00	56.98
anamox1_curated_scaffold_52482 Species: Truepera radiovictrix (50%)	2	1038 bp	68.59	1.00	91.33
anamox1_curated_scaffold_52526 Species: Truepera radiovictrix (50%)	2	1093 bp	68.62	1.00	100.18
anamox1_curated_scaffold_52877 Species: Truepera radiovictrix (50%)	2	1128 bp	68.53	1.00	85.90
anamox1_curated_scaffold_52916 Species: Truepera radiovictrix (50%)	2	1109 bp	67.63	1.00	90.35
anamox1_curated_scaffold_44405 Species: Truepera radiovictrix (100%)	2	1291 bp	72.35	1.00	87.61
anamox1_curated_scaffold_44460 Species: Truepera radiovictrix (50%)	2	1200 bp	72.00	1.00	90.25
anamox1_curated_scaffold_105136 Species: Truepera radiovictrix (50%)	2	1598 bp	73.22	1.00	49.37
anamox1_curated_scaffold_108266 Species: Truepera radiovictrix (50%)	2	1103 bp	60.83	1.00	23.12
anamox1_curated_scaffold_35104 Species: Truepera radiovictrix (50%)	2	1554 bp	70.59	1.00	78.44
anamox1_curated_scaffold_35398 Species: Truepera radiovictrix (50%)	2	1535 bp	67.17	1.00	72.31
anamox1_curated_scaffold_35458 Species: Truepera radiovictrix (50%)	2	1541 bp	68.01	1.00	97.14
anamox1_curated_scaffold_35604 Species: Truepera radiovictrix (50%)	2	1498 bp	71.43	1.00	45.86
anamox1_curated_scaffold_35712 Species: Truepera radiovictrix (50%)	2	1513 bp	69.07	1.00	90.02
anamox1_curated_scaffold_35729 Species: Truepera radiovictrix (50%)	2	1504 bp	73.34	1.00	95.55
anamox1_curated_scaffold_40174 Species: Truepera radiovictrix (50%)	2	1393 bp	73.58	1.00	100.14
anamox1_curated_scaffold_40453 Species: Truepera radiovictrix (100%)	2	1362 bp	72.91	1.00	98.90
anamox1_curated_scaffold_40661 Species: Truepera radiovictrix (50%)	2	1364 bp	71.63	1.00	96.33
anamox1_curated_scaffold_36113 Species: Truepera radiovictrix (100%)	2	1519 bp	70.84	1.00	100.13
anamox1_curated_scaffold_36120 Species: Truepera radiovictrix (100%)	2	1519 bp	68.86	1.00	99.93
anamox1_curated_scaffold_36596 Species: Truepera radiovictrix (100%)	2	1172 bp	68.86	1.00	92.41
anamox1_curated_scaffold_36616 Species: Truepera radiovictrix (50%)	2	1507 bp	67.22	1.00	80.62
anamox1_curated_scaffold_48002 Species: Truepera radiovictrix (50%)	2	1159 bp	71.35	1.00	91.89
anamox1_curated_scaffold_48911 Species: Truepera radiovictrix (50%)	2	1128 bp	69.77	1.00	100.27
anamox1_curated_scaffold_55420 Species: RLO_RIF_CHLX_71_12 (50%)	2	785 bp	70.32	1.00	90.57
anamox1_curated_scaffold_55582 Species: Paracoccus halophilus (50%)	2	1042 bp	66.60	1.00	63.63
anamox1_curated_scaffold_55728 Species: Truepera radiovictrix (100%)	2	959 bp	73.83	1.00	90.72
anamox1_curated_scaffold_55729 Species: Haliangium ochraceum (50%)	2	1061 bp	49.76	1.00	50.61
anamox1_curated_scaffold_42815 Species: Truepera radiovictrix (50%)	2	1328 bp	64.38	1.00	64.83
anamox1_curated_scaffold_42923 Species: Truepera radiovictrix (100%)	2	1318 bp	71.78	1.00	95.14
anamox1_curated_scaffold_42973 Species: Truepera radiovictrix (100%)	2	1318 bp	73.90	1.00	100.15
anamox1_curated_scaffold_61483 Species: Truepera radiovictrix (50%)	2	695 bp	72.66	1.00	91.51
anamox1_curated_scaffold_61806 Species: Truepera radiovictrix (50%)	2	1000 bp	74.60	1.00	99.00
anamox1_curated_scaffold_61962 Species: Truepera radiovictrix (50%)	2	1053 bp	69.52	1.00	95.16
anamox1_curated_scaffold_59484 Species: Truepera radiovictrix (50%)	2	1031 bp	72.94	1.00	86.13
anamox1_curated_scaffold_59593 Species: Truepera radiovictrix (50%)	2	1149 bp	70.76	1.00	93.47
anamox1_curated_scaffold_59811 Species: Truepera radiovictrix (50%)	2	1026 bp	70.66	1.00	98.25
anamox1_curated_scaffold_47036 Species: Truepera radiovictrix (100%)	2	1196 bp	70.48	1.00	96.57

Displaying items 151-200 of 317 in total

anamox1_Truepera_radiovictrix_71_5_curated

anamox1_Truepera_radiovictrix_69_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

anamox1_Truepera_radiovictrix_71_5_curated

anamox1_Truepera_radiovictrix_69_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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