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anamox2_Xanthomonadales_68_9_curated

anamox2_Xanthomonadales_68_1
In projects: anamox2  |  LAC_year1  |  LAC_reactor_startup  |  anammox_full

Consensus taxonomy: Xanthomonadales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying 21 items
contig # features sequence size GC content (%) Cov Coding Density (%)
anamox2_curated_scaffold_88
Order: Xanthomonadales (77.1%)
131 138891 bp 67.44 1.00 92.52
anamox2_curated_scaffold_216
Order: Xanthomonadales (77.17%)
127 140590 bp 68.00 1.00 90.46
anamox2_curated_scaffold_45
Order: Xanthomonadales (78.45%)
116 141855 bp 67.47 1.00 92.95
anamox2_curated_scaffold_503
Order: Xanthomonadales (70.8%)
113 116744 bp 67.79 1.00 90.60
anamox2_curated_scaffold_409
Order: Xanthomonadales (83.13%)
83 85043 bp 67.90 1.00 94.38
anamox2_curated_scaffold_211
Genus: Lysobacter (52%)
75 87746 bp 67.62 1.00 92.39
anamox2_curated_scaffold_161
Order: Xanthomonadales (75.36%)
69 75758 bp 67.40 1.00 93.28
anamox2_curated_scaffold_482
Order: Xanthomonadales (76.47%)
68 73804 bp 67.64 1.00 91.45
anamox2_curated_scaffold_593
Order: Xanthomonadales (84%)
50 37148 bp 66.21 1.00 88.52
anamox2_curated_scaffold_373
Order: Xanthomonadales (71.74%)
46 47995 bp 68.52 1.00 90.51
anamox2_curated_scaffold_332
Order: Xanthomonadales (83.72%)
43 50958 bp 65.58 1.00 91.47
anamox2_curated_scaffold_460
Order: Xanthomonadales (70.73%)
41 42315 bp 69.02 1.00 92.87
anamox2_curated_scaffold_640
Order: Xanthomonadales (78.95%)
38 34819 bp 67.24 1.00 88.89
anamox2_curated_scaffold_740
Genus: Lysobacter (60%)
30 31839 bp 67.76 1.00 96.95
anamox2_curated_scaffold_960
Order: Xanthomonadales (86.67%)
30 26604 bp 67.60 1.00 93.54
anamox2_curated_scaffold_754
Order: Xanthomonadales (66.67%)
27 31368 bp 66.79 1.00 92.22
anamox2_curated_scaffold_1842
Genus: Lysobacter (50%)
24 22161 bp 68.99 1.00 91.41
anamox2_curated_scaffold_1425
Order: Xanthomonadales (76.19%)
21 20244 bp 66.84 1.00 84.94
anamox2_curated_scaffold_1251
Genus: Lysobacter (52.63%)
19 21731 bp 68.63 1.00 95.63
anamox2_curated_scaffold_3769
Genus: Lysobacter (54.55%)
11 9164 bp 68.74 1.00 93.17
anamox2_curated_scaffold_7601
Genus: Lysobacter (50%)
6 5452 bp 70.30 1.00 98.83
Displaying 21 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.