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anamox3_Acidobacteria_71_4_curated

anamox3_Acidobacteria_70_1
In projects: anamox3  |  LAC_year1  |  LAC_reactor_startup  |  anammox_full

Consensus taxonomy: Acidobacteria  →  Bacteria

Displaying items 1-50 of 772 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
anamox3_curated_scaffold_15326
Phylum: Acidobacteria (100%)
9 3078 bp 69.17 1.00 91.33
anamox3_curated_scaffold_11994
Phylum: Acidobacteria (100%)
8 3693 bp 70.67 1.00 93.58
anamox3_curated_scaffold_27958
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (57.14%)
7 3949 bp 68.37 1.00 98.23
anamox3_curated_scaffold_21252
Phylum: Acidobacteria (57.14%)
7 3152 bp 71.41 1.00 79.19
anamox3_curated_scaffold_5927
Phylum: Acidobacteria (85.71%)
7 6578 bp 68.41 1.00 89.94
anamox3_curated_scaffold_15264
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
6 4439 bp 68.12 1.00 96.24
anamox3_curated_scaffold_8945
Phylum: Acidobacteria (66.67%)
6 5542 bp 72.52 1.00 87.75
anamox3_curated_scaffold_23986
Phylum: Acidobacteria (100%)
6 2592 bp 69.52 1.00 89.24
anamox3_curated_scaffold_22641
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (66.67%)
6 2993 bp 68.39 1.00 97.93
anamox3_curated_scaffold_15678
Phylum: Acidobacteria (50%)
6 3605 bp 68.90 1.00 67.49
anamox3_curated_scaffold_8426
Phylum: Acidobacteria (50%)
6 5294 bp 71.72 1.00 83.59
anamox3_curated_scaffold_12919
Species: uncultured Acidobacteria bacterium (60%)
5 3419 bp 67.56 1.00 59.67
anamox3_curated_scaffold_17733 5 3859 bp 69.78 1.00 74.55
anamox3_curated_scaffold_16338
Phylum: Acidobacteria (80%)
5 3692 bp 65.87 1.00 73.94
anamox3_curated_scaffold_28082
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (60%)
5 3390 bp 66.55 1.00 74.96
anamox3_curated_scaffold_18908
Domain: Bacteria (60%)
5 5070 bp 61.58 1.00 69.11
anamox3_curated_scaffold_51891
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (60%)
5 1568 bp 70.09 1.00 99.49
anamox3_curated_scaffold_9081
Phylum: Acidobacteria (100%)
5 4540 bp 73.39 1.00 100.18
anamox3_curated_scaffold_82364
Phylum: Acidobacteria (60%)
5 1269 bp 65.72 1.00 86.05
anamox3_curated_scaffold_14651
Species: R_Acidobacteria_67_21 (60%)
5 3189 bp 64.00 1.00 52.49
anamox3_curated_scaffold_21537
Domain: Bacteria (60%)
5 2475 bp 69.54 1.00 85.58
anamox3_curated_scaffold_9627
Species: R_Acidobacteria_67_21 (80%)
5 4343 bp 70.62 1.00 93.05
anamox3_curated_scaffold_10960
Phylum: Acidobacteria (80%)
5 3940 bp 69.29 1.00 79.26
anamox3_curated_scaffold_14107
Domain: Bacteria (60%)
5 3250 bp 69.91 1.00 78.28
anamox3_curated_scaffold_21975
Phylum: Acidobacteria (60%)
5 2958 bp 69.78 1.00 88.74
anamox3_curated_scaffold_16250
Phylum: Acidobacteria (100%)
5 2943 bp 72.48 1.00 96.94
anamox3_curated_scaffold_13579
Phylum: Acidobacteria (80%)
5 3370 bp 66.74 1.00 79.14
anamox3_curated_scaffold_16483
Phylum: Acidobacteria (60%)
5 2911 bp 70.53 1.00 97.80
anamox3_curated_scaffold_32942
Phylum: Acidobacteria (80%)
5 1649 bp 66.10 1.00 85.20
anamox3_curated_scaffold_35892
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
4 1553 bp 72.76 1.00 97.17
anamox3_curated_scaffold_16670
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated (50%)
4 2882 bp 73.59 1.00 96.50
anamox3_curated_scaffold_13186
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (75%)
4 3443 bp 69.91 1.00 92.45
anamox3_curated_scaffold_29462 4 1830 bp 62.62 1.00 68.03
anamox3_curated_scaffold_16570
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
4 2898 bp 70.15 1.00 99.69
anamox3_curated_scaffold_19215
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
4 2590 bp 69.31 1.00 80.62
anamox3_curated_scaffold_13577
Species: R_Acidobacteria_68_18 (50%)
4 3296 bp 63.59 1.00 76.55
anamox3_curated_scaffold_40439
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
4 1947 bp 68.72 1.00 85.82
anamox3_curated_scaffold_15295
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
4 3071 bp 71.64 1.00 71.31
anamox3_curated_scaffold_31122
Species: R_Acidobacteria_61_28 (50%)
4 1748 bp 67.16 1.00 81.35
anamox3_curated_scaffold_10900
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
4 3955 bp 67.99 1.00 90.19
anamox3_curated_scaffold_34207
Domain: Bacteria (75%)
4 1614 bp 65.80 1.00 92.19
anamox3_curated_scaffold_10808
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
4 3870 bp 69.56 1.00 78.14
anamox3_curated_scaffold_20529
Phylum: Acidobacteria (75%)
4 2460 bp 70.16 1.00 95.24
anamox3_curated_scaffold_23112
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
4 2240 bp 69.78 1.00 90.40
anamox3_curated_scaffold_37437
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (100%)
4 2576 bp 69.14 1.00 91.54
anamox3_curated_scaffold_16098
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
4 2964 bp 72.37 1.00 87.96
anamox3_curated_scaffold_11931
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
4 3690 bp 73.90 1.00 95.77
anamox3_curated_scaffold_25442
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
4 2056 bp 72.96 1.00 99.95
anamox3_curated_scaffold_20515
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
4 2461 bp 70.42 1.00 72.53
anamox3_curated_scaffold_30613
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
4 1773 bp 72.25 1.00 91.71
Displaying items 1-50 of 772 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.