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anamox3_Chloroflexi_68_6_curated

anamox3_Chloroflexi_67_1
In projects: anamox3  |  LAC_year1  |  LAC_reactor_startup  |  anammox_full

Consensus taxonomy: Chloroflexi  →  Bacteria

Displaying items 1-50 of 479 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
anamox3_curated_scaffold_2350
Phylum: Chloroflexi (86.67%)
15 19055 bp 66.87 1.00 78.67
anamox3_curated_scaffold_3226
Species: CG_Anaero_02 (85.71%)
14 9730 bp 65.92 1.00 84.76
anamox3_curated_scaffold_5570
Species: CG_Anaero_02 (100%)
14 6529 bp 65.61 1.00 89.23
anamox3_curated_scaffold_3070
Species: CG_Anaero_02 (75%)
12 12296 bp 67.56 1.00 87.19
anamox3_curated_scaffold_2349
Domain: Bacteria (90.91%)
11 13328 bp 67.72 1.00 85.98
anamox3_curated_scaffold_2640
Domain: Bacteria (72.73%)
11 11717 bp 65.67 1.00 89.46
anamox3_curated_scaffold_10509
Domain: Bacteria (54.55%)
11 9771 bp 68.80 1.00 81.98
anamox3_curated_scaffold_2783
Class: Anaerolineae (54.55%)
11 11922 bp 66.00 1.00 87.39
anamox3_curated_scaffold_2700
Species: CG_Anaero_02 (54.55%)
11 11737 bp 63.97 1.00 75.58
anamox3_curated_scaffold_3519
Species: CG_Anaero_02 (60%)
10 13217 bp 66.17 1.00 79.19
anamox3_curated_scaffold_5992
Species: CG_Anaero_02 (60%)
10 6899 bp 68.36 1.00 88.58
anamox3_curated_scaffold_5560
Phylum: Chloroflexi (80%)
10 9926 bp 67.18 1.00 76.77
anamox3_curated_scaffold_6603
Species: CG_Anaero_02 (60%)
10 8483 bp 66.87 1.00 87.67
anamox3_curated_scaffold_3696
Species: CG_Anaero_02 (50%)
10 8745 bp 66.61 1.00 83.12
anamox3_curated_scaffold_7725
Species: CG_Anaero_02 (70%)
10 7360 bp 66.97 1.00 84.58
anamox3_curated_scaffold_2794
Domain: Bacteria (70%)
10 10992 bp 68.58 1.00 96.37
anamox3_curated_scaffold_3937
Species: CG_Anaero_02 (70%)
10 8357 bp 65.20 1.00 93.87
anamox3_curated_scaffold_3559
Phylum: Chloroflexi (70%)
10 9607 bp 69.66 1.00 92.15
anamox3_curated_scaffold_3164
Species: CG_Anaero_02 (60%)
10 14228 bp 67.14 1.00 81.77
anamox3_curated_scaffold_4763
Phylum: Chloroflexi (77.78%)
9 7108 bp 70.69 1.00 87.70
anamox3_curated_scaffold_3761
Domain: Bacteria (100%)
9 8720 bp 67.40 1.00 91.69
anamox3_curated_scaffold_3648
Phylum: Chloroflexi (88.89%)
9 12722 bp 67.62 1.00 67.32
anamox3_curated_scaffold_3731
Domain: Bacteria (88.89%)
9 8592 bp 65.14 1.00 83.03
anamox3_curated_scaffold_3044
Phylum: Chloroflexi (66.67%)
9 10277 bp 68.40 1.00 95.22
anamox3_curated_scaffold_5522
Domain: Bacteria (77.78%)
9 6495 bp 68.42 1.00 91.64
anamox3_curated_scaffold_4387
Phylum: Chloroflexi (77.78%)
9 7927 bp 65.76 1.00 83.64
anamox3_curated_scaffold_3714
Phylum: Chloroflexi (66.67%)
9 8705 bp 68.19 1.00 80.54
anamox3_curated_scaffold_5333
Species: CG_Anaero_02 (66.67%)
9 8929 bp 68.43 1.00 87.32
anamox3_curated_scaffold_11989
Domain: Bacteria (66.67%)
9 7226 bp 70.72 1.00 95.78
anamox3_curated_scaffold_6506
Species: CG_Anaero_02 (66.67%)
9 5815 bp 64.73 1.00 70.92
anamox3_curated_scaffold_4824
Phylum: Chloroflexi (77.78%)
9 7143 bp 66.93 1.00 89.75
anamox3_curated_scaffold_3786
Class: Anaerolineae (55.56%)
9 8626 bp 66.15 1.00 88.51
anamox3_curated_scaffold_9025
Phylum: Chloroflexi (77.78%)
9 7793 bp 67.50 1.00 90.00
anamox3_curated_scaffold_3581
Domain: Bacteria (88.89%)
9 9048 bp 64.99 1.00 87.23
anamox3_curated_scaffold_3546
Species: BJP_IG2157_Anaerolineales_55_23 (66.67%)
9 8951 bp 64.92 1.00 95.02
anamox3_curated_scaffold_5279
Class: Anaerolineae (55.56%)
9 6815 bp 66.97 1.00 75.03
anamox3_curated_scaffold_3865
Phylum: Chloroflexi (100%)
8 10057 bp 70.33 1.00 90.83
anamox3_curated_scaffold_6111
Phylum: Chloroflexi (50%)
8 6049 bp 64.77 1.00 67.60
anamox3_curated_scaffold_3407
Species: CG_Anaero_02 (62.5%)
8 9386 bp 66.57 1.00 75.94
anamox3_curated_scaffold_6290
Domain: Bacteria (87.5%)
8 7617 bp 66.90 1.00 85.98
anamox3_curated_scaffold_8550
Domain: Bacteria (62.5%)
8 4882 bp 65.98 1.00 76.69
anamox3_curated_scaffold_10547
Phylum: Chloroflexi (62.5%)
8 7446 bp 64.07 1.00 93.35
anamox3_curated_scaffold_7505
Species: CG_Anaero_02 (62.5%)
8 7791 bp 69.98 1.00 86.72
anamox3_curated_scaffold_12477
Species: CG_Anaero_02 (87.5%)
8 3592 bp 66.01 1.00 86.44
anamox3_curated_scaffold_4549
Phylum: Chloroflexi (50%)
8 7485 bp 66.45 1.00 89.70
anamox3_curated_scaffold_7171
Phylum: Chloroflexi (50%)
8 6944 bp 61.94 1.00 82.86
anamox3_curated_scaffold_4731
Species: CG_Anaero_02 (50%)
8 6485 bp 65.04 1.00 78.87
anamox3_curated_scaffold_8302
Domain: Bacteria (62.5%)
8 9329 bp 61.60 1.00 64.38
anamox3_curated_scaffold_4359
Phylum: Chloroflexi (62.5%)
8 7767 bp 66.36 1.00 87.22
anamox3_curated_scaffold_4179
Phylum: Chloroflexi (50%)
8 8020 bp 65.36 1.00 80.57
Displaying items 1-50 of 479 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.