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anamox4_Bacteria_63_7_curated

anamox4_Bacteria_63_1
In projects: anamox4  |  LAC_year1  |  LAC_reactor_startup  |  anammox_full

Consensus taxonomy: Bacteria

Displaying items 1-50 of 351 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
anamox4_curated_scaffold_347
Domain: Bacteria (85.37%)
41 43084 bp 60.74 1.00 91.29
anamox4_curated_scaffold_365
Phylum: Chloroflexi (63.16%)
38 41123 bp 60.75 1.00 91.24
anamox4_curated_scaffold_416
Domain: Bacteria (82.35%)
34 37050 bp 63.45 1.00 93.89
anamox4_curated_scaffold_721
Phylum: Chloroflexi (67.65%)
34 23981 bp 61.65 1.00 92.97
anamox4_curated_scaffold_570
Phylum: Chloroflexi (63.64%)
33 30488 bp 62.14 1.00 91.08
anamox4_curated_scaffold_419
Domain: Bacteria (63.64%)
33 41155 bp 62.17 1.00 84.86
anamox4_curated_scaffold_668
Domain: Bacteria (71.88%)
32 25742 bp 61.99 1.00 90.64
anamox4_curated_scaffold_423
Domain: Bacteria (87.1%)
31 36461 bp 61.66 1.00 86.48
anamox4_curated_scaffold_359
Phylum: Chloroflexi (59.26%)
27 41530 bp 63.32 1.00 93.76
anamox4_curated_scaffold_611
Domain: Bacteria (88.89%)
27 27896 bp 63.83 1.00 90.45
anamox4_curated_scaffold_504
Domain: Bacteria (85.19%)
27 31872 bp 63.67 1.00 91.03
anamox4_curated_scaffold_626
Phylum: Chloroflexi (73.08%)
26 27361 bp 59.70 1.00 89.30
anamox4_curated_scaffold_736
Domain: Bacteria (65.38%)
26 23494 bp 62.42 1.00 88.49
anamox4_curated_scaffold_775
Phylum: Chloroflexi (62.5%)
24 22146 bp 62.42 1.00 87.51
anamox4_curated_scaffold_557
Domain: Bacteria (79.17%)
24 29560 bp 62.28 1.00 89.24
anamox4_curated_scaffold_870
Domain: Bacteria (65.22%)
23 19770 bp 63.40 1.00 89.49
anamox4_curated_scaffold_757
Phylum: Chloroflexi (69.57%)
23 22839 bp 62.31 1.00 94.29
anamox4_curated_scaffold_848
Domain: Bacteria (72.73%)
22 20302 bp 63.04 1.00 81.66
anamox4_curated_scaffold_1060
Domain: Bacteria (76.19%)
21 16105 bp 61.97 1.00 91.38
anamox4_curated_scaffold_719
Phylum: Chloroflexi (61.9%)
21 24092 bp 62.23 1.00 86.22
anamox4_curated_scaffold_627
Phylum: Chloroflexi (52.38%)
21 27497 bp 62.68 1.00 90.16
anamox4_curated_scaffold_924
Domain: Bacteria (75%)
20 18530 bp 64.02 1.00 88.40
anamox4_curated_scaffold_776
Phylum: Chloroflexi (65%)
20 22099 bp 61.81 1.00 90.38
anamox4_curated_scaffold_660
Phylum: Chloroflexi (52.63%)
19 26075 bp 63.42 1.00 95.05
anamox4_curated_scaffold_940
Phylum: Chloroflexi (57.89%)
19 18279 bp 62.27 1.00 96.29
anamox4_curated_scaffold_829
Phylum: Chloroflexi (52.63%)
19 20531 bp 66.73 1.00 94.41
anamox4_curated_scaffold_695
Phylum: Chloroflexi (52.63%)
19 25145 bp 61.82 1.00 89.20
anamox4_curated_scaffold_1928 19 16595 bp 62.02 1.00 85.25
anamox4_curated_scaffold_812
Domain: Bacteria (73.68%)
19 21057 bp 63.64 1.00 85.91
anamox4_curated_scaffold_737
Phylum: Chloroflexi (61.11%)
18 23459 bp 63.58 1.00 85.78
anamox4_curated_scaffold_3581
Domain: Bacteria (50%)
18 15672 bp 62.20 1.00 95.18
anamox4_curated_scaffold_1000
Phylum: Chloroflexi (50%)
18 17377 bp 64.66 1.00 88.58
anamox4_curated_scaffold_1361
Domain: Bacteria (77.78%)
18 21414 bp 63.98 1.00 83.64
anamox4_curated_scaffold_927
Phylum: Chloroflexi (66.67%)
18 18496 bp 61.88 1.00 90.33
anamox4_curated_scaffold_918
Phylum: Chloroflexi (55.56%)
18 18678 bp 62.19 1.00 97.51
anamox4_curated_scaffold_1179
Domain: Bacteria (88.24%)
17 22401 bp 63.04 1.00 94.36
anamox4_curated_scaffold_1589
Phylum: Chloroflexi (52.94%)
17 17386 bp 63.32 1.00 88.80
anamox4_curated_scaffold_1064
Phylum: Chloroflexi (70.59%)
17 15931 bp 62.38 1.00 94.06
anamox4_curated_scaffold_1028
Domain: Bacteria (76.47%)
17 16815 bp 62.59 1.00 88.75
anamox4_curated_scaffold_1368
Phylum: Chloroflexi (64.71%)
17 19032 bp 62.30 1.00 78.53
anamox4_curated_scaffold_991
Domain: Bacteria (82.35%)
17 17436 bp 62.19 1.00 89.80
anamox4_curated_scaffold_1294
Domain: Bacteria (70.59%)
17 14226 bp 64.08 1.00 98.04
anamox4_curated_scaffold_1079
Domain: Bacteria (88.24%)
17 19951 bp 62.29 1.00 91.36
anamox4_curated_scaffold_799
Phylum: Chloroflexi (68.75%)
16 21517 bp 63.27 1.00 84.32
anamox4_curated_scaffold_1267
Domain: Bacteria (62.5%)
16 17418 bp 62.64 1.00 87.20
anamox4_curated_scaffold_922
Phylum: Chloroflexi (68.75%)
16 18562 bp 62.47 1.00 95.76
anamox4_curated_scaffold_1348
Domain: Bacteria (50%)
16 13308 bp 64.08 1.00 92.37
anamox4_curated_scaffold_1343
Phylum: Chloroflexi (50%)
16 13352 bp 63.54 1.00 92.12
anamox4_curated_scaffold_1253
Phylum: Chloroflexi (66.67%)
15 14685 bp 64.13 1.00 95.02
anamox4_curated_scaffold_1087
Phylum: Chloroflexi (60%)
15 15944 bp 62.78 1.00 96.31
Displaying items 1-50 of 351 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.