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13_1_20CM_4_Rokubacteria_70_13

Consensus taxonomy: Rokubacteria  →  Bacteria

Description

formerly known as 13_1_20CM_4_temporary

Displaying items 1-50 of 256 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_20cm_4_scaffold_170651
Species: GWA2_Rokubacteria_73_35_curated (50%)
2 1285 bp 51.36 19.92 76.34
13_1_20cm_4_scaffold_38431
Species: Pyrinomonas methylaliphatogenes (50%)
2 2441 bp 56.25 17.79 96.11
13_1_20cm_4_scaffold_90947
Species: Anaeromyxobacter dehalogenans (50%)
2 3073 bp 57.21 12.01 98.70
13_1_20cm_4_scaffold_220951
Species: GWC2_Rokubacteria_70_16_curated (50%)
2 1132 bp 59.19 14.41 99.38
13_1_20cm_4_scaffold_23393
Species: R_Acidobacteria_67_28 (100%)
1 3003 bp 59.84 12.37 96.00
13_1_20cm_4_scaffold_45378
Species: RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated (50%)
2 2278 bp 61.28 12.34 93.11
13_1_20cm_4_scaffold_208228
Species: GWA2_Rokubacteria_73_35_curated (100%)
1 1170 bp 62.91 16.09 100.00
13_1_20cm_4_scaffold_194449
Species: R_Rokubacteria_73_56 (100%)
1 1210 bp 63.06 12.03 70.41
13_1_20cm_4_scaffold_49190
Species: Geobacter daltonii (50%)
2 3610 bp 63.21 17.24 94.49
13_1_20cm_4_scaffold_224662
Species: Candidatus Entotheonella sp. TSY2 (50%)
2 1121 bp 63.25 11.87 98.75
13_1_20cm_4_scaffold_225968
Species: R_Rokubacteria_73_56 (50%)
2 1117 bp 63.83 15.73 85.14
13_1_20cm_4_scaffold_57741
Species: RLO_Betaproteobacteria_68_20 (50%)
2 2053 bp 64.10 13.57 64.88
13_1_20cm_4_scaffold_224148
Species: RLO_Deltaproteobacteria_60_16 (50%)
2 1122 bp 64.71 18.12 99.20
13_1_20cm_4_scaffold_226439
Species: GWA2_Rokubacteria_70_23_curated (50%)
2 1116 bp 65.14 13.49 97.58
13_1_20cm_4_scaffold_74394
Species: GWA2_Rokubacteria_73_35_curated (66.67%)
3 1842 bp 65.15 14.31 96.91
13_1_20cm_4_scaffold_43822
Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)
2 2310 bp 65.24 14.56 96.49
13_1_20cm_4_scaffold_231088
Species: RLO_Betaproteobacteria_68_20 (100%)
1 1102 bp 65.25 16.17 99.91
13_1_20cm_4_scaffold_31592
Species: RLO_RIF_CHLX_71_12 (100%)
2 2651 bp 65.33 13.26 98.91
13_1_20cm_4_scaffold_253543
Species: GWA2_Rokubacteria_73_35_curated (50%)
2 1038 bp 65.41 12.57 96.24
13_1_20cm_4_scaffold_173085
Species: RLO_Deltaproteobacteria_60_19 (50%)
2 1277 bp 65.54 12.78 99.37
13_1_20cm_4_scaffold_30611
Species: RLO_Gemmatimonadetes_68_9 (50%)
4 2687 bp 65.87 15.60 100.93
13_1_20cm_4_scaffold_154334
Species: GWA2_Rokubacteria_73_35_curated (100%)
3 1343 bp 65.90 13.27 70.59
13_1_20cm_4_scaffold_70324
Species: Bradyrhizobium sp. LTSPM299 (50%)
2 1889 bp 65.96 17.14 89.89
13_1_20cm_4_scaffold_235463
Species: GWA2_Rokubacteria_73_35_curated (66.67%)
3 1089 bp 66.02 13.60 90.91
13_1_20cm_4_scaffold_217647
Species: R_Rokubacteria_73_56 (50%)
2 1142 bp 66.11 11.65 98.25
13_1_20cm_4_scaffold_183146
Species: RLO_Gemmatimonadetes_68_9 (100%)
2 1244 bp 66.16 16.14 101.05
13_1_20cm_4_scaffold_208186
Species: GWA2_Rokubacteria_73_35_curated (100%)
1 1170 bp 66.24 15.88 99.74
13_1_20cm_4_scaffold_235848
Species: R_Rokubacteria_73_56 (50%)
2 1088 bp 66.36 17.99 61.76
13_1_20cm_4_scaffold_77456
Species: GWA2_Rokubacteria_73_35_curated (100%)
2 1811 bp 66.43 13.31 99.89
13_1_20cm_4_scaffold_266438
Species: uncultured bacterium (50%)
2 1004 bp 66.43 14.50 96.22
13_1_20cm_4_scaffold_256884
Species: RBG_16_Euryarchaeota_68_13_curated (100%)
1 1029 bp 66.67 14.88 99.71
13_1_20cm_4_scaffold_258516
Species: RBG_13_Chloroflexi_60_13_curated (50%)
2 1025 bp 66.73 13.71 100.10
13_1_20cm_4_scaffold_50921
Species: R_Rokubacteria_73_56 (75%)
4 3034 bp 66.81 13.40 99.08
13_1_20cm_4_scaffold_44694
Species: R_Rokubacteria_73_56 (100%)
1 2291 bp 66.83 12.05 84.72
13_1_20cm_4_scaffold_68301
Species: GWA2_Rokubacteria_73_35_curated (50%)
2 1913 bp 67.02 14.56 99.90
13_1_20cm_4_scaffold_191157
Species: R_Rokubacteria_73_56 (100%)
2 1220 bp 67.13 14.20 87.79
13_1_20cm_4_scaffold_154456
Species: R_Rokubacteria_73_56 (75%)
4 2311 bp 67.20 11.84 86.20
13_1_20cm_4_scaffold_167772
Species: RLO_Gemmatimonadetes_68_9 (100%)
1 1294 bp 67.23 12.61 99.92
13_1_20cm_4_scaffold_152432
Species: GWA2_Rokubacteria_73_35_curated (50%)
2 1351 bp 67.28 13.93 93.26
13_1_20cm_4_scaffold_65146
Species: R_Rokubacteria_71_18 (100%)
2 1951 bp 67.30 17.24 98.56
13_1_20cm_4_scaffold_57405
Species: GWA2_Rokubacteria_73_35_curated (100%)
2 2058 bp 67.44 13.66 99.56
13_1_20cm_4_scaffold_9486
Domain: Bacteria (83.33%)
6 5089 bp 67.58 12.33 92.20
13_1_20cm_4_scaffold_201427
Species: GWC2_Gemmatimonadetes_71_10_curated (100%)
1 1189 bp 67.62 13.72 89.07
13_1_20cm_4_scaffold_124790
Species: R_Rokubacteria_73_56 (50%)
4 2721 bp 67.77 13.19 91.95
13_1_20cm_4_scaffold_137836
Species: Rubrobacter radiotolerans (50%)
2 1412 bp 67.78 12.62 92.42
13_1_20cm_4_scaffold_145417
Species: GWA2_Rokubacteria_73_35_curated (100%)
1 1379 bp 67.80 14.02 99.86
13_1_20cm_4_scaffold_225753
Species: RLO_Rokubacteria_71_22 (100%)
1 1117 bp 67.86 14.16 99.91
13_1_20cm_4_scaffold_26085
Species: R_Rokubacteria_71_18 (75%)
4 2872 bp 67.86 14.94 99.65
13_1_20cm_4_scaffold_22246
Species: GWA2_Rokubacteria_73_35_curated (75%)
4 3065 bp 67.86 12.28 96.12
13_1_20cm_4_scaffold_6626
Species: GWA2_Rokubacteria_73_35_curated (66.67%)
3 4968 bp 67.87 13.69 91.49
Displaying items 1-50 of 256 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.