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13_2_20cm_scaffold_2762_5

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: comp(2917..4095)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, periplasmic component id=4288064 bin=GWF2_Methylomirabilis_70_14 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 385.0
  • Bit_score: 622
  • Evalue 3.50e-175
  • rbh
extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 392.0
  • Bit_score: 621
  • Evalue 6.40e-175
branched-chain amino acid ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 396.0
  • Bit_score: 288
  • Evalue 3.40e-75

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGACTTTCAAGACGGTCGGTGTGTTCGTCGCCGGCATCGCCGTGCTGGCGGCCACCGCGGCGGTCGTGGACGCGCAGGGTCCGATACGGATCGGCGCGTCGATGTCGCTCACCGGAACCTACGCCAAGCTCGGCAAGAACCAGCACGAAGGCTACAAGCTCTGCGAGCGCGATCTGAACGCCAAGGGCGGTGTGCTCGGTCGCAAGGTCGAGATCGTCGTCTACGACGATCAGTCGATGCCCGCCACCGCGGTGCGGCTCTACGAGAAGCTCATCACCGAGGACAAGGTGGACGGCGTCATGGGACCGTACTCGTCCCCGGTCACCGAGGCGGCCGCCAACGTGACCGAGAAGTACAAGAAGGTGATGGTGTCGCCGCTCGCCGCCACGACCTCGATCTTCCGGAAGGGCCGGAAGTACATCTTCATGGTCATCTCGCCGGCCGAGGTCTACCTGGAGGGCCTCCTCGACATCGCCGCCAAGCGTGGGCTGAAGACGGTCGCGGTCATCAACGAGGACACGCTCTTCTCCAAGGCGGCGGCCGCCGGCGCGACCGATCTCGCCAAGAAGAAGGGCATGCAGGTCGTCTTCACCGAGGCTTATCCCAAGGGCAACACGGATTTCTCGGCGCTCCTCACCAAGGTCAAGTCGCTCAATCCCGACGTCATCGCGGCCGGCACCTACTTCGACGATGCGGTCGCCCTCACGCGGCAGATGCGGGAGCTGAACGTCAATCCCAAGATGTTCGGCGTGACCGTGGGCGGCGATCTCCCCGAGTTCTACGACACGCTCAAGCAGAACGCCGAGTACATCTACGGCTCGACGCAGTGGGAGCCGTCGCTGCCCTATCCCGGGAACAAGGAGTTCTTCGACTCCTACAAGAAGGAGTTCGGCCACGAGCCGTCGTATCACTCGGCGGCGGGCTACGCCGGCTGCCTGATCTACGCCGAAGGCGTCAAGCGCGCCGGCTCGCTCGACGCCGACAAGGTGCGCGAGGCGCTGCTGAAGCTCGACATGAAGACGATGTTCGGTGAGTACAAGGTCGACCAGGATGGCTTTCAGGTCGCCCACAAGATGGTGCTCTTCCAGTGGCACGAGGGGAAGAAGTTCACCGTCTGGCCGGACGAGCTGGCCGCGGCCAAGCCGCACTTCCCGACGCCGCCCTGGAACCAACGGTAA
PROTEIN sequence
Length: 393
MTFKTVGVFVAGIAVLAATAAVVDAQGPIRIGASMSLTGTYAKLGKNQHEGYKLCERDLNAKGGVLGRKVEIVVYDDQSMPATAVRLYEKLITEDKVDGVMGPYSSPVTEAAANVTEKYKKVMVSPLAATTSIFRKGRKYIFMVISPAEVYLEGLLDIAAKRGLKTVAVINEDTLFSKAAAAGATDLAKKKGMQVVFTEAYPKGNTDFSALLTKVKSLNPDVIAAGTYFDDAVALTRQMRELNVNPKMFGVTVGGDLPEFYDTLKQNAEYIYGSTQWEPSLPYPGNKEFFDSYKKEFGHEPSYHSAAGYAGCLIYAEGVKRAGSLDADKVREALLKLDMKTMFGEYKVDQDGFQVAHKMVLFQWHEGKKFTVWPDELAAAKPHFPTPPWNQR*