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rifcsphigho2_01_scaffold_4444_13

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_37_200

partial RP 35 / 55 MC: 5 BSCG 5 / 51 ASCG 28 / 38
Location: 10242..11156

Top 3 Functional Annotations

Value Algorithm Source
Putative mRNA 3-end processing factor n=1 Tax=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) RepID=A1RT67_PYRIL similarity UNIREF
DB: UNIREF100
  • Identity: 31.1
  • Coverage: 293.0
  • Bit_score: 142
  • Evalue 6.30e-31
mRNA 3-end processing factor similarity KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 293.0
  • Bit_score: 142
  • Evalue 1.80e-31
Putative mRNA 3-end processing factor {ECO:0000313|EMBL:ABL88149.1}; TaxID=384616 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum i similarity UNIPROT
DB: UniProtKB
  • Identity: 31.1
  • Coverage: 293.0
  • Bit_score: 142
  • Evalue 8.80e-31

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Taxonomy

Pyrobaculum islandicum → Pyrobaculum → Thermoproteales → Thermoprotei → Crenarchaeota → Archaea

Sequences

DNA sequence
Length: 915
ATGATATCATTTGACAATTTATTTAAGTTAAAGGCTGCGGAGCTTGGCTTAGATAAGCCTGAAGGGAGAGAAGTTACTTTAGTAAGCCATGCACATACTGATCATATGCCTACACGCTTTAAAAATAATGCTCTTTGTTGTTCAAAACTTACAAAGAAAGTAATTGCTTTAAGGAGAAAAGTATCTGAAATAATAGATTATAAAAGCAGTGCAATAAGACAACTCCCGGCAGGGCATATATTGGGCAGCAGTATGTTTCTAATTAATAAAAAATTGCTTTATACAGGAGATTTCAATACACAGGGGGTGTATTGCGGAGTAGCAAAGCCCATAAAATGTGAAACTCTGATAATGGAATGTACTTATGGCAGTCCGGAGTATATTTTTCCAAAAAAACAAGAAGTTGCTGCTGAAATAGCTGAATATGTCCAAAAGCATGAAGAAAGTGTAATAATGATGCTTGATTCTTTTGGGAAACCCCAAGAAATCTGTCATATTTTAGAGCGCCATAAAGTTCCTTTCACAATGCATTCCCGAATCGCTAATTTCAATAAGCAGTTAGATTTAAATTTTAAGTATTATGAACCGAAGTCTTCAGTGTTTATAAGTGGAATGCATGATGCGGCTTTTTTGCCTCCGAGCTATAAAAGAGTGTTGTTGACAGGATGGATAGCACAGAATTCAAGGTTTAAGCAAGGCATTGATAAGGGATTTGTGTTTTCAAGTCATTCAGACTATCCTTCACTTATTGATTTTGTAAGAAAGTGTAATCCTGATCGTGTGTACACACACCACGGTCCCGCACATAAATTCGCTGTAGACTTGCGAAAACTAGGGTATAATGCCGAATCGTTAGACGTTTTGATGGGGAAGCAAACGTCTTCGGGGTGGCAGCGCACACTTGGTGGCTTTTAG
PROTEIN sequence
Length: 305
MISFDNLFKLKAAELGLDKPEGREVTLVSHAHTDHMPTRFKNNALCCSKLTKKVIALRRKVSEIIDYKSSAIRQLPAGHILGSSMFLINKKLLYTGDFNTQGVYCGVAKPIKCETLIMECTYGSPEYIFPKKQEVAAEIAEYVQKHEESVIMMLDSFGKPQEICHILERHKVPFTMHSRIANFNKQLDLNFKYYEPKSSVFISGMHDAAFLPPSYKRVLLTGWIAQNSRFKQGIDKGFVFSSHSDYPSLIDFVRKCNPDRVYTHHGPAHKFAVDLRKLGYNAESLDVLMGKQTSSGWQRTLGGF*