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rifcsphigho2_01_scaffold_8866_23

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_33_47

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 29 / 38 MC: 1
Location: comp(14311..15279)

Top 3 Functional Annotations

Value Algorithm Source
rfc; replication factor C small subunit; K04801 replication factor C small subunit Tax=CG_Pacearch_03 similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 319.0
  • Bit_score: 502
  • Evalue 6.10e-139
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5046355 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 317.0
  • Bit_score: 401
  • Evalue 1.00e-108
Replication factor C small subunit similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 317.0
  • Bit_score: 377
  • Evalue 4.50e-102

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Taxonomy

CG_Pacearch_03 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 969
ATGGATGAGGTTGATTCAAGCATTTGGACCGAAAAATATCGGCCGAAGAACTTCGAAGACGTTGTTGGGCAGGATGAGATTATTAAAAAAGTCAGGAATTTGACAAAGTCATTAAATATTCCGCATATGCTTTTTGCCGGGCCTCCTGGAACGGGAAAGTCCACGCTTGCTTTAATTACTGTTCGAGAGCTTTTTGGAAAAACCTGGCGCGATAATTATCTAGAATTAAATGCCAGTGATGAACGAGGGATTGATGTTGTTCGACAAAAGGTCAAGGATTTTGCTCGAACGAAGGCGTTGGGAAATGTACCGTTCAAAATTATTTTTCTTGATGAGGCAGATGCATTGACGAGAGAAGCGCAGCAAGCATTGCGACGAACGATGGAAAATTATACCTCGACGTGTCGATTTATCATGTCCTGCAACTACAGCAGTAAAGTCATTGATCCGATTCAATCACGCTGTTTAATTTTTCGCTTCAAATTGTTAGAAAAAAAAGACATCGAGAAACGCGTAAAAATTATAGCTGAGCAGGAAAAATTAGATATCAACGATGACGCTATAGAGGTTTTGTATGAAGTGAGCGAGGGCGATTTTCGACGTGTTATAAATCTTTTGCAGGCAAGCTCTTCTATTTCTCCGTCGATAACTGCTGAGCTCATTAATACTCTGTCTTCAAGCGCACGACCTTCAGATATTAAAGTCGTTTTGGAATATTCTTTGAGCGGTGATTTTTTGAAGGCCAAGGATAAACTGCTTGATATTATGCTGCGGGAATCGATTGCTGGGACAGATATAATAAAATCAATTCAAAAAGAAATTTGGAACTTGAATATTGAACCAGATTTAAAGGTTAGGCTGACGGAAAAAACAGGCGAGATTGAATTTCGCATGGTTGAAGGCAGTGACGAATTTATTCAACTGGAGGCATTGCTTGCTTCGTTTGTTTTGGCCGGCATGGGAAAATGA
PROTEIN sequence
Length: 323
MDEVDSSIWTEKYRPKNFEDVVGQDEIIKKVRNLTKSLNIPHMLFAGPPGTGKSTLALITVRELFGKTWRDNYLELNASDERGIDVVRQKVKDFARTKALGNVPFKIIFLDEADALTREAQQALRRTMENYTSTCRFIMSCNYSSKVIDPIQSRCLIFRFKLLEKKDIEKRVKIIAEQEKLDINDDAIEVLYEVSEGDFRRVINLLQASSSISPSITAELINTLSSSARPSDIKVVLEYSLSGDFLKAKDKLLDIMLRESIAGTDIIKSIQKEIWNLNIEPDLKVRLTEKTGEIEFRMVEGSDEFIQLEALLASFVLAGMGK*