ggKbase home page

rifcsphigho2_01_scaffold_9860_22

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_33_47

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 29 / 38 MC: 1
Location: comp(15406..16104)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 231.0
  • Bit_score: 290
  • Evalue 2.00e-75
TrmB family transcriptional regulator id=5044157 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 240.0
  • Bit_score: 200
  • Evalue 1.50e-48
transcriptional regulator TrmB similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 239.0
  • Bit_score: 130
  • Evalue 5.30e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Pacearchaeota_36_9_curated → Pacearchaeota → DPANN → Archaea

Sequences

DNA sequence
Length: 699
ATGATAGAAGAACTTCAGCAAATTGGATTAACGACAAATGAATGCAAGGTTTATTTAGCTTTGATTAATCATGGTGTTAGTTTGGCAGGAACAATATCTAGAAAAACGGGGTTACATCGAAGAAGCGTTTATGATATTACTGAGATGCTTGTTAAAAAAGGATTAATTGGTTATATTGTAAAGAATAATAGACGGTATTTTGAAGCAGTACATCCTCAAAAAATATTAGATATAATAAAAGAGAAGGAGAATATTTTATCTCCTTTGGTAAATGAATTGACTCAATCATTTGAATCTAAAAAGGAAAAACAGGAGACTAATTTTTACAAAGGGAAGGATGGGTTAAAAACTATTTTTGAAGAACAACTCAATCATAAAGAGATTTTCATTTTAGGTGCTTCAACTAAAGCGTATGAGATTTTGCAGTTTTATTTTATTTGGTATGATAAAAAAAGAAAAAAGAAAAAAATTAAGACACGTATTATTACTTCTGATCCTAAGATTTTGAAAATACCATTAGCCGACATTCGTTACATACCTGAAAAATATGCGAGTCCTGTTGCGGTTAATATTTATGGTGATAAAACTGCGATTATATTGTGGGCTAAAGAGCCTATCGCTATCGTTATTAAGAACCAAGAAATAGCAGAGGGATATCGTAATTATTTCGAAATTATGTGGAAGATTGGGAAGAAGTGA
PROTEIN sequence
Length: 233
MIEELQQIGLTTNECKVYLALINHGVSLAGTISRKTGLHRRSVYDITEMLVKKGLIGYIVKNNRRYFEAVHPQKILDIIKEKENILSPLVNELTQSFESKKEKQETNFYKGKDGLKTIFEEQLNHKEIFILGASTKAYEILQFYFIWYDKKRKKKKIKTRIITSDPKILKIPLADIRYIPEKYASPVAVNIYGDKTAIILWAKEPIAIVIKNQEIAEGYRNYFEIMWKIGKK*