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rifcsphigho2_01_scaffold_6128_11

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_34_23

partial RP 31 / 55 MC: 6 BSCG 19 / 51 MC: 1 ASCG 27 / 38
Location: comp(9204..9719)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Caulobacter crescentus OR37 RepID=R0E963_CAUCE similarity UNIREF
DB: UNIREF100
  • Identity: 29.4
  • Coverage: 153.0
  • Bit_score: 60
  • Evalue 1.80e-06
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Aminicenantes_63_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 28.1
  • Coverage: 171.0
  • Bit_score: 61
  • Evalue 1.10e-06

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Taxonomy

RBG_13_Aminicenantes_63_10_curated → Aminicenantes → Bacteria

Sequences

DNA sequence
Length: 516
ATGGTAAGCTTTTCGGATTACTTTGTTGACCTTGTTAATGAATTGGAAAAGTCTAAAGATACATTGATTAGGGGAGTTCAGTTGAGATTGGGAATTTCTTATTGTGATGCTGAAGATTGTTTTCAGAATGCTTATGTCGGATTAGTTCAATCTTCTATTGATGGTAGATTAGATTCAGACAGATCTGGAAGAGGATATTTTTGCGAGAGTTTGAGAAATGCTTGTTTGGATTTTTTACGTTTGAAAAGAAAAATGCCTGTCAATTTGGAAGATGCTTCTTCATTTCCTGGTAGCTCAAAAGGACCTTCTGATGAGGCTGTTTTGCATGAAGACTTAGAACGTTATGAAAGGGCAGTTGCTTCAATGCCTTGTTCTTGTTATGATGCGTTTAAACTTTATGTAGTCGATGGACTTAGTAGGGAAGAGGTTGCTCAAAGATTGGGGCTAAGACTTAATGCTGTTTCGGTTAGAGTTCATAGGGCTGAGAAGTTTTTGATGAAAAAGATGACTGTTTAA
PROTEIN sequence
Length: 172
MVSFSDYFVDLVNELEKSKDTLIRGVQLRLGISYCDAEDCFQNAYVGLVQSSIDGRLDSDRSGRGYFCESLRNACLDFLRLKRKMPVNLEDASSFPGSSKGPSDEAVLHEDLERYERAVASMPCSCYDAFKLYVVDGLSREEVAQRLGLRLNAVSVRVHRAEKFLMKKMTV*