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rifcsplowo2_01_scaffold_78_203

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_46_24

near complete RP 40 / 55 MC: 6 BSCG 8 / 51 ASCG 36 / 38 MC: 1
Location: comp(205811..206398)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5046344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 402
  • Evalue 2.20e-109
  • rbh
tRNA-intron endonuclease, archaea type {ECO:0000313|EMBL:KHO46145.1}; EC=4.6.1.16 {ECO:0000313|EMBL:KHO46145.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 402
  • Evalue 3.00e-109
tRNA-intron endonuclease similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 195.0
  • Bit_score: 212
  • Evalue 1.50e-52

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Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 588
ATGCCAAAAAAACAGGATAGGCAGGATAAAAAGGAAATGCCAAAGAATATTGTCAGGGCCAAGGAATTGGTCAATGCCATATACAGCAATGACCGCATCATAACCTTCAATACCGACCAGGCAAGGGAACTGGGGCAAAACAGTGGATATGGCTCTTTTTTGGAGGACGGCAGGCTGCAGCTTTCCTACCTGGAAACCTACTATCTGATTGAAAAAAAGAAGCTGCATTTGGCAGATAGCAGGAATAATGAGGTTTTGCCGGACAGTTTTCTCAAAAAGGCAAAAAGGCATGAAAAAAATTTCTGGACAAAATATGTTGTTTTCAGGGATATCCGCAACAGGGGGTATATAATAAAAACTGCCCTGAAATTTGGTGCGGATTTTCGGGTGTATGACCGGGGGGTCAAGCCGGGCCAGGACCATGCCAAGTGGGTTCTTTATCCTGTGGGTGAGAGTTCAAACCTGACGTGGCATGAGTTTGCAGCAAAAAACCGCGTTGCGCATTCCACAAAAAAAAGGCTGCTGGTGGGCATTGTCGATGATGAGAACGATGTCACTTATTATGAAATTAAATGGGTGAGGCCATAG
PROTEIN sequence
Length: 196
MPKKQDRQDKKEMPKNIVRAKELVNAIYSNDRIITFNTDQARELGQNSGYGSFLEDGRLQLSYLETYYLIEKKKLHLADSRNNEVLPDSFLKKAKRHEKNFWTKYVVFRDIRNRGYIIKTALKFGADFRVYDRGVKPGQDHAKWVLYPVGESSNLTWHEFAAKNRVAHSTKKRLLVGIVDDENDVTYYEIKWVRP*