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rifcsplowo2_01_scaffold_78_233

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_46_24

near complete RP 40 / 55 MC: 6 BSCG 8 / 51 ASCG 36 / 38 MC: 1
Location: comp(249124..249663)

Top 3 Functional Annotations

Value Algorithm Source
tbpE; transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5046314 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 347
  • Evalue 9.90e-93
  • rbh
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 347
  • Evalue 1.40e-92
TATA-box-binding protein similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 177.0
  • Bit_score: 259
  • Evalue 5.90e-67

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Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 540
ATGGGAAAAAAGGAAATTCAAGTGGTTAACATCGTGGTAAGCACTTCTCTGAAACATGACATCCCATTGGAAAAAATGGCTGCCACCCTCAGCAATACAGAATACAATCCGGAACAATTCCCTGGGCTTGTTATAAGGATTAAGGAGCCAAAGACTTCTGCATTGATTTTCAGCTCTGGCAAGATTGTATGCACAGGAGCCAGGAGCATGGACAAAGTGGAAGAAAGCATTAAGAAAATTATCAAAAGCCTGGAAAAAATAAATGTCAAGATCACAATCAAGCCTGAAATCAAGATCCAGAACATAGTTGCCTCAGGCACAGTTGGGATGGACCTTAACCTCAATACACTGGCCATGAAACTGGACAACACAGAATATGAGCCTGAGCAGTTCCCGGGGCTTGTTTACAAGCTGCCACAGGCCAAAGCCACATTCCTGCTTTTCAGTAATGGCAAAGTGGTGTGCACCGGAACCAAGAGTGAGGCAGAAGTGCACAAGGCTCTTGACAAGCTGATTGAAAATCTAAAAAAAGTTGTGTGA
PROTEIN sequence
Length: 180
MGKKEIQVVNIVVSTSLKHDIPLEKMAATLSNTEYNPEQFPGLVIRIKEPKTSALIFSSGKIVCTGARSMDKVEESIKKIIKSLEKINVKITIKPEIKIQNIVASGTVGMDLNLNTLAMKLDNTEYEPEQFPGLVYKLPQAKATFLLFSNGKVVCTGTKSEAEVHKALDKLIENLKKVV*