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rifcsplowo2_01_scaffold_7949_13

Organism: RIFCSPLOWO2_01_FULL_Woesearchaeota_Archaea_34_35

partial RP 32 / 55 MC: 3 BSCG 8 / 51 ASCG 29 / 38 MC: 1
Location: 8868..9656

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component RRP42 {ECO:0000313|EMBL:KHO52038.1}; EC=3.1.13.- {ECO:0000313|EMBL:KHO52038.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 261.0
  • Bit_score: 307
  • Evalue 1.40e-80
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 id=5045737 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 263.0
  • Bit_score: 294
  • Evalue 1.50e-76
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 256.0
  • Bit_score: 260
  • Evalue 3.90e-67

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Taxonomy

archaeon GW2011_AR17 → Archaea

Sequences

DNA sequence
Length: 789
ATGGTATCTGAATTAAAATCATACATTGAATCGTTGCTGAGCAAGGGCGTTAGAGCTGATTTAAGGAAATTGGATGAATATAGAAAACCAATAAATGTTGAATATGGCATATCAGCAAAGTCAGCTGAAGGCTCTGCAAAAATAACAATGGGTGATACAGTTATTGTTGCTGGTGTTAAATTTGGAGTTGACAAGCCATATCCTGATAATCCTGATGAGGGGAGCATAGTTGTTAATGTTGAATTGCTGCCTTTGTCAAGCCCTGATTTTGAATCTGGACCCCCTGATGTTGATGCCATAGAATTAGCAAGGGTTGTTGACAGAGCTGTTAGGGAAAGCAAGGCAATTGACTTCAAGAAATTATGCATTAAAGAAGGAGAGAAATGCTGGATGATATTCATTGACATTTATACAATAAACGAGGCTGGCAATCTGTTTGATGCAGCTAACTTGGCAGCACTTGCTGCTTTGCAGGATGCAAGATATCCAAAATATGATGAGAAAACAGGTGTTGTTGCTTATGATGAAAGAACTAGCAAGCCAATAGAGCTTTTGAAAATACCCATATCGTGCACAATTTTAAAAATAGGAAATAATTTAATTGTTGATCCAGATTTAGAAGAAGAAAAGGCAATGGACGCAAGATTGACTGTTGCAACAGCTGATGATGATACTATTTGCGCGATGCAGAAGGGCGGAGAGGTACCTTTGACAACAGAAGAAGTAAAAAAAATAGTAGACATAGCATTTAAAAAGAGGCCTGAACTGCTGAAATACTTGAAAAAATGA
PROTEIN sequence
Length: 263
MVSELKSYIESLLSKGVRADLRKLDEYRKPINVEYGISAKSAEGSAKITMGDTVIVAGVKFGVDKPYPDNPDEGSIVVNVELLPLSSPDFESGPPDVDAIELARVVDRAVRESKAIDFKKLCIKEGEKCWMIFIDIYTINEAGNLFDAANLAALAALQDARYPKYDEKTGVVAYDERTSKPIELLKIPISCTILKIGNNLIVDPDLEEEKAMDARLTVATADDDTICAMQKGGEVPLTTEEVKKIVDIAFKKRPELLKYLKK*