ggKbase home page

rifoxyc1_full_scaffold_2175_1

Organism: RIFOXYC1_FULL_Pacearchaeota_33_130

partial RP 34 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 28 / 38 MC: 2
Location: comp(126..842)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380BDC3 similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 234.0
  • Bit_score: 169
  • Evalue 3.80e-39
transcriptional regulator TrmB Tax=CG_Micra_04 similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 237.0
  • Bit_score: 217
  • Evalue 1.70e-53
transcriptional regulator TrmB similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 245.0
  • Bit_score: 129
  • Evalue 9.30e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Micra_04 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 717
ATGAACCCAGAAAAAGTATTAGAAAAAATCGGCTTCAGTCCAAATGAGATAAAAACGTATTTGGTATTAAATGAAAAAGGCTCATTACCTGCAGGAAAAGTTGCAAAGCACGCAAAGATAGACCGAAGCAGTTGTTATAATTCTCTAAAAATTCTCCAAGAAAAAGGACTCGTAAGTTACGTAATTATTTCCAACGTAAAATATTTTCAATCAACAGGTCCAAGAAAAATTCTCGATTTCATAAAGACACAAGAGCAAGATGTCAAAGAGATAATCCCCCAACTTGAAGAAAAAAGAAAAGTAAAAACTTCCGAAGGGCAAGTAAGATTATTCAAAGGGGAAAAAGGAATCCGAACTATTTTTTTAGATATGATAAGAGAAGGCAAAGATAATTTCGTTTTTGGTTCAGAAGGACAATTTTCCGAAAGAATGCCGGAGTTCGCTTTACAATTTGACAGAATGAAAAGAGAAAAGAAAATAAAAACAAAAGTCCTAATAAGAAAAGATAGAACTGAAGCCGACGACACAACGACACAATACGCCTACGCCCCAAACATTGCCGAAAGCTCTGCAGTCACAAACATCTACGGCGACAAAATAGCAATAATAATTTGGACCGACGAACCCGAAGGAATAATCATCGAAAACCCCGCTGCAGCAAAAGCATATAAATCTTATTTTGATTTTATGTGGAAGCACGCAAAGAAATTCAAATGA
PROTEIN sequence
Length: 239
MNPEKVLEKIGFSPNEIKTYLVLNEKGSLPAGKVAKHAKIDRSSCYNSLKILQEKGLVSYVIISNVKYFQSTGPRKILDFIKTQEQDVKEIIPQLEEKRKVKTSEGQVRLFKGEKGIRTIFLDMIREGKDNFVFGSEGQFSERMPEFALQFDRMKREKKIKTKVLIRKDRTEADDTTTQYAYAPNIAESSAVTNIYGDKIAIIIWTDEPEGIIIENPAAAKAYKSYFDFMWKHAKKFK*