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rifoxyb2_full_scaffold_8745_5

Organism: RIFOXYB2_FULL_DPANN_28_150_partial

partial RP 24 / 55 MC: 1 BSCG 12 / 51 ASCG 27 / 38 MC: 3
Location: 4326..4745

Top 3 Functional Annotations

Value Algorithm Source
SRP54-type protein, GTPase domain n=1 Tax=sediment metagenome RepID=D9PEV7_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 124.0
  • Bit_score: 138
  • Evalue 4.20e-30
Suspect SCG annotation. See neighboring gene [rifoxyb2_full_scaffold_8745_6]. split_gene in-house
  • Identity: null
  • Coverage: null
  • Bit_score: null
SRP54-type protein, GTPase domain {ECO:0000313|EMBL:EFK97893.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 124.0
  • Bit_score: 138
  • Evalue 5.80e-30

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Notes

split gene Cindy Castelle (4/15/15)

Taxonomy

sediment metagenome

Sequences

DNA sequence
Length: 420
ATGCTAGAAAAACTTGGAGAAGTATTAAAAAAAACAACAGACAAAGTTGCAAATGCAATATTTCTTGATAAAAATTTAGTGGATGATGAATTATTAAGCATATTAGGAAAATACAAAAAATTAGAATTAAACGAAAAACAAAACAGAATTTTACTTTTAGGTTTATACGGAGCAGGTAAAACCACAACAATTGCAAAACTTGGAAACTACTATGCAAAACGAGGAAATAAGGTAGCACTGGTTGGTTTAGATGTTCATAGACCTGCCGCAAAAGAACAATTAAAACAATTAGCAGAAAAACATAAAAGAATTAGTCAAAGAAATCAAATCACTTGGAAAAGAAATAGAACCAACAGAAACAATTTTAGTAATGCCAGCAGATATCGGGCAAGCTGCAAAAACACAAGCCCAGGAATTTAA
PROTEIN sequence
Length: 140
MLEKLGEVLKKTTDKVANAIFLDKNLVDDELLSILGKYKKLELNEKQNRILLLGLYGAGKTTTIAKLGNYYAKRGNKVALVGLDVHRPAAKEQLKQLAEKHKRISQRNQITWKRNRTNRNNFSNASRYRASCKNTSPGI*