ggKbase home page

rifoxyb2_full_scaffold_47851_3

Organism: RIFOXYB2_FULL_DPANN_28_150_partial

partial RP 24 / 55 MC: 1 BSCG 12 / 51 ASCG 27 / 38 MC: 3
Location: comp(1159..1380)

Top 3 Functional Annotations

Value Algorithm Source
LSU ribosomal protein L24A (Rpl24A) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29713_ARCFU id=5103029 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 73.0
  • Bit_score: 83
  • Evalue 1.10e-13
NusG antitermination factor Tax=AR13 similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 73.0
  • Bit_score: 134
  • Evalue 4.40e-29
LSU ribosomal protein L24A Rpl24A similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 73.0
  • Bit_score: 83
  • Evalue 3.10e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

AR13 → Pacearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 222
ATGGTCGAACCATCAATAGAATCAATCTCAATTGAAGAAGGAGATATTGTCGAATTAATCGGTGCCTCATTAAAAGGAGAAAAAGCAAAAGTGACAAGAATTGATAAACAAAAAGAAGAAGCAGTAGTAAACTTACTAGGTGCAGTTGTACCTTTACCAGTAACAGTTAAATTAGATAATATTAAAGTAATTAGAAGAGCAGGAGACCAAAATGCAGATTAA
PROTEIN sequence
Length: 74
MVEPSIESISIEEGDIVELIGASLKGEKAKVTRIDKQKEEAVVNLLGAVVPLPVTVKLDNIKVIRRAGDQNAD*