ggKbase home page

13_1_20cm_4_scaffold_192144_1

Organism: 13_1_20CM_4_Euryarchaeota_52_7

partial RP 20 / 55 MC: 13 BSCG 7 / 51 MC: 3 ASCG 21 / 38 MC: 16
Location: comp(2..760)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0 UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 253.0
  • Bit_score: 361
  • Evalue 1.30e-96
ATP-dependent DNA ligase I (EC:6.5.1.1) similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 253.0
  • Bit_score: 358
  • Evalue 2.20e-96
DNA ligase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=DNLI_NITMS similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 253.0
  • Bit_score: 358
  • Evalue 7.90e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Marine Group I thaumarchaeote SCGC AAA799-P11 → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 759
ATGAAATTTTCGCTGGTAGCAGAGACACTAAAATTCATGGAGGGTACAACAAAACGACTGGAATTAACAAAATATTTAGTAGATTTATTCAAGATCACCCCTCCAGAAATCATTTCACAGGTTGTTTATCTTCTTCAGGGCAAGTTAAGACCTGATCATGAAGGAGTAGAAATGGGCATTGCCGAAAAAATTGCAATAAAAGCAATATCAAAATCTGCTGGCATACCAGCAAAAAAAATCCAACAAGAATATAACAAGATGGGAGATTTTGGTCAAGCTGCATCAAAAATATTAGAGCAAAAAACGCAAACAACATTTCTTACACAAGATATTACAGTTGAAAGAGTGTATGACACACTATACAAGATTGCGGAATTAAAAGGAGCCCGTTCTCAGGACATGAAAATGAAATACATCTCTAGTCTTCTAAATGATGCAACTCCAACTGAGGCTGGATTTATCCTCAAAATAATTACAAACTCTTTACGATTAGGCATTGCTGATTTTACCATTCTAGATTCTCTTGCAATTGCATTTACAGGAACTAAAGAAAACCGTGCAATATTAGAACATGCATATAACGTGTCAAGTGATTTGGGCAAGGTTGCGGCAGCAGTTGCAAAAGATGGAATCGATGCGTTAAAAAACTTCCAAGTTGCAGTATTTAGTCCTGTGAGACCAATGCTTGCAGAGAGGGTCAAGAGTCCACAAGAAGCACATGAGAAAATGGGCTCAGAATTTGCTGCAGAATACAAACTA
PROTEIN sequence
Length: 253
MKFSLVAETLKFMEGTTKRLELTKYLVDLFKITPPEIISQVVYLLQGKLRPDHEGVEMGIAEKIAIKAISKSAGIPAKKIQQEYNKMGDFGQAASKILEQKTQTTFLTQDITVERVYDTLYKIAELKGARSQDMKMKYISSLLNDATPTEAGFILKIITNSLRLGIADFTILDSLAIAFTGTKENRAILEHAYNVSSDLGKVAAAVAKDGIDALKNFQVAVFSPVRPMLAERVKSPQEAHEKMGSEFAAEYKL