ggKbase home page

rifcsphigho2_01_scaffold_9060_10

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_57_88

near complete RP 30 / 55 MC: 4 BSCG 6 / 51 ASCG 34 / 38 MC: 1
Location: 11383..12108

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RifOxyA12_full_OD1_Moranbacteria_35_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 245.0
  • Bit_score: 257
  • Evalue 2.60e-65
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein id=5041698 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 241.0
  • Bit_score: 209
  • Evalue 4.40e-51
ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 249.0
  • Bit_score: 192
  • Evalue 1.60e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RifOxyA12_full_OD1_Moranbacteria_35_19_curated → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGTTAATTGTAAAAAACTTAAAAAAAAGCTACGGAGGAATAAAAGCGGTAGACGGATGCAGCTGCAAGATTAATGAGAACGATATCACTGCCCTAATCGGGCCGAATGGCTCAGGAAAAACGACTGTATTCAATATCATTTCCGGACTGGTCTCAGCGGATGCTGGGGAGGTAGTGCTGGGGTCAAAAAACATAATGGGGAAATCCCCTCAGGCAATCGTTAACCTAGGCATCTCCCGCCTGTTTCAGCACTCCAGGGTGTTTGGGAACTTGACCGTAACGGAGAACCTCCTGCTGTCTTTTGACAAGGAAAACACCAAATTCCTGAAAACGTTCTTGGGATATAAGCTCAGCCAAAAGAAAATTGGTCGTGTGTTAAGGTTGTTGAAGCTCAATGCCTTCCAAAATCAAAAAGCAGGGGAATTGAGCTATGGTCAGAAAAGACTGGTCGAGCTGGGCAGGGCTGTCGTCCAGCCTCACAATGTTCTCCTCTTAGATGAACCAGTTGCTGGCGTCGCTCCTAGACTGAGGGTTGCCATCGGGGACGCGCTGCTTCAGCTTAAAAGGGAAGGCGAAACAATCTTTTTTATTGAGCATGACATAGATTTTGTATTGAAGGTTGCAGACCATGTCATAGTGATGGACCAGGGGAGGGTCATTGCGCGTGGAGTTCCTGGAAAGATAAGGAGAAACAGGAAAGTGATGGAAGCATATCTGGGAAGATGA
PROTEIN sequence
Length: 242
MLIVKNLKKSYGGIKAVDGCSCKINENDITALIGPNGSGKTTVFNIISGLVSADAGEVVLGSKNIMGKSPQAIVNLGISRLFQHSRVFGNLTVTENLLLSFDKENTKFLKTFLGYKLSQKKIGRVLRLLKLNAFQNQKAGELSYGQKRLVELGRAVVQPHNVLLLDEPVAGVAPRLRVAIGDALLQLKREGETIFFIEHDIDFVLKVADHVIVMDQGRVIARGVPGKIRRNRKVMEAYLGR*