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BJP_Ig2157_Hor_140_2014_Thermoplasmata_53_6

07V140M03_2014_Euryarchaeota_52_6
In projects: 07V140M03_2014  |  diaphorachaeota  |  archaea_ggkbase  |  horonobe_genomes

Consensus taxonomy: Euryarchaeota  →  Archaea

Metagenomic Context

Parent: BJP_IG2157_UNK

Properties

Avg. coverage: 6.27 Longest contig: 13.27 Kbp Bin length: 776.56 Kbp GC content: 52.38 %
Contigs count: 246 Features count: 885 rRNAs count: 0 tRNAs count: 11

Genome completeness

partial RP 25 / 55 BSCG 9 / 51 ASCG 28 / 38 MC: 3

Description

Fragmented. May not be clean -->curated, please check (YA) Thermoplasmata archaeon HGW-Thermoplasmata-2 (possibly novel; 61.1% of identity based on NCBI blast search) old name; BJP_IG2157_Euryarchaeota_53_6

Displaying items 151-200 of 246 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2157_scaffold_10622
Species: Methanocella conradii (50%)
2 2228 bp 53.99 6.80 100.05
bjp_ig2157_scaffold_10879
Species: Archaeoglobus veneficus (50%)
2 2192 bp 50.27 5.41 70.76
bjp_ig2157_scaffold_14327
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1787 bp 56.52 4.28 97.87
bjp_ig2157_scaffold_18156
Species: RBG_13_Euryarchaeota_61_15_curated (50%)
2 1484 bp 51.42 4.75 90.16
bjp_ig2157_scaffold_14077
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1813 bp 48.65 5.30 88.69
bjp_ig2157_scaffold_14079
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
2 1813 bp 54.66 4.88 93.49
bjp_ig2157_scaffold_5128
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 3734 bp 54.34 6.31 95.13
bjp_ig2157_scaffold_22258
Species: Methanobrevibacter sp. AbM4 (50%)
2 1262 bp 53.96 4.87 67.04
bjp_ig2157_scaffold_29183
Species: RBG_13_Euryarchaeota_31_8_curated (50%)
2 1003 bp 53.64 5.83 99.60
bjp_ig2157_scaffold_15989
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
2 1640 bp 52.07 5.67 99.51
bjp_ig2157_scaffold_15494
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1682 bp 56.30 7.49 98.63
bjp_ig2157_scaffold_12297
Species: Candidatus Methanoplasma termitum (50%)
2 2006 bp 53.24 6.66 86.89
bjp_ig2157_scaffold_10917
Species: Thermoplasmatales archaeon SCGC AB-539-N05 (100%)
2 2188 bp 54.66 5.42 78.43
bjp_ig2157_scaffold_25769
Species: groundwater metagenome (50%)
2 1116 bp 48.75 2.96 92.74
bjp_ig2157_scaffold_9981
Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)
2 2337 bp 50.24 4.81 57.77
bjp_ig2157_scaffold_15519
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
2 1680 bp 53.33 5.89 92.86
bjp_ig2157_scaffold_19872
Species: Thermoplasmatales archaeon SCGC AB-539-N05 (50%)
2 1382 bp 53.40 6.84 94.21
bjp_ig2157_scaffold_16115
Species: Methanotorris formicicus (50%)
2 1629 bp 53.41 5.89 89.13
bjp_ig2157_scaffold_18216
Species: Thermococcus gammatolerans (50%)
2 1479 bp 55.98 3.55 76.06
bjp_ig2157_scaffold_27520
Species: RBG_16_Euryarchaeota_68_13_curated (50%)
2 1055 bp 54.88 5.40 95.26
bjp_ig2157_scaffold_5699
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 3477 bp 54.96 5.95 76.27
bjp_ig2157_scaffold_10948
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 2183 bp 51.90 7.08 85.48
bjp_ig2157_scaffold_23246
Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)
2 1217 bp 51.27 5.79 88.99
bjp_ig2157_scaffold_23503
Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)
2 1206 bp 52.24 6.09 73.88
bjp_ig2157_scaffold_13266
Species: Aciduliprofundum boonei (50%)
2 1894 bp 46.36 5.70 83.47
bjp_ig2157_scaffold_17109
Species: CG_Elusi_05 (100%)
2 1556 bp 47.37 7.33 100.06
bjp_ig2157_scaffold_10195
Species: Candidatus Methanomassiliicoccus intestinalis (50%)
2 2299 bp 51.67 5.94 67.42
bjp_ig2157_scaffold_18494
Species: BJP_IG2069_Methanobacteriales_33_27 (100%)
2 1462 bp 46.51 4.41 69.36
bjp_ig2157_scaffold_26704
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1083 bp 48.57 6.23 80.33
bjp_ig2157_scaffold_13544
Species: BJP_IG2069_Spirochaetales_48_31 (50%)
2 1862 bp 47.53 4.19 97.15
bjp_ig2157_scaffold_9777
Species: Thermoplasmatales archaeon SCGC AB-539-N05 (100%)
2 2372 bp 51.52 8.03 88.91
bjp_ig2157_scaffold_29271
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
2 1000 bp 53.40 3.90 83.40
bjp_ig2157_scaffold_25832
Species: Thermoplasmatales archaeon SCGC AB-539-N05 (50%)
2 1114 bp 52.69 5.12 84.56
bjp_ig2157_scaffold_16418
Species: Natrinema gari (50%)
2 1606 bp 52.30 6.54 101.99
bjp_ig2157_scaffold_27306
Species: groundwater metagenome (50%)
2 1063 bp 54.56 7.90 90.03
bjp_ig2157_scaffold_17398
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1536 bp 49.09 7.52 82.81
bjp_ig2157_scaffold_15588
Species: Halococcus salifodinae (50%)
2 1675 bp 54.27 6.99 89.55
bjp_ig2157_scaffold_20508
Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)
2 1349 bp 51.74 5.00 90.73
bjp_ig2157_scaffold_13835
Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)
2 1835 bp 51.06 6.78 75.53
bjp_ig2157_scaffold_6741
Species: Thermoplasmatales archaeon SCGC AB-539-N05 (50%)
2 3107 bp 49.73 4.63 69.23
bjp_ig2157_scaffold_23565
Species: RBG_16_Euryarchaeota_41_19_curated (50%)
2 1203 bp 49.88 3.24 80.80
bjp_ig2157_scaffold_15089
Species: Thermoplasmatales archaeon SCGC AB-539-N05 (50%)
2 1718 bp 55.24 4.45 75.61
bjp_ig2157_scaffold_18552
Species: archaeon GW2011_AR19 (50%)
2 1459 bp 54.15 5.65 89.86
bjp_ig2157_scaffold_24546
Species: Methanococcoides methylutens (50%)
2 1162 bp 54.56 4.65 87.26
bjp_ig2157_scaffold_26254
Species: RBG_16_Chloroflexi_48_7_curated (50%)
2 1099 bp 53.69 4.78 90.90
bjp_ig2157_scaffold_23070
Species: BJP_IG2158_Thermoplasmatales_53_16 (50%)
2 1225 bp 54.78 5.27 98.45
bjp_ig2157_scaffold_8376
Species: Thermoplasmatales archaeon SCGC AB-540-F20 (50%)
2 2660 bp 48.61 4.96 89.32
bjp_ig2157_scaffold_23077
Species: Methanobacterium formicicum (50%)
2 1225 bp 46.12 3.18 86.94
bjp_ig2157_scaffold_21499
Species: BJP_IG2158_Thermoplasmatales_53_16 (100%)
1 1298 bp 51.54 5.20 86.90
bjp_ig2157_scaffold_29079
Species: RBG_13_Euryarchaeota_61_15_curated (100%)
1 1006 bp 51.89 6.86 79.92
Displaying items 151-200 of 246 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.