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13_1_40cm_3_scaffold_3537

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3537_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(93..521)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IF92_ACIB4
SSU ribosomal protein S23e (S12p) Tax=RBG_16_Euryarchaeota_68_12_curated
30S ribosomal protein S12
13_1_40cm_3_scaffold_3537_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(602..1669)
DNA (1068bp) protein (356aa)
heat shock protein; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_16_Euryarchaeota_68_12_curated
Putative Protease HtpX homolog n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AS12_9ARCH
heat shock protein
13_1_40cm_3_scaffold_3537_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

1709..2503
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0N732_9EURY
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_40cm_3_scaffold_3537_4
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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comp(2912..4126)
DNA (1215bp) protein (405aa)
Ammonium transporter id=2210474 bin=GWB2_Clostridiales_37_7 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good + rbh
ammonium transporter; K03320 ammonium transporter, Amt family Tax=GWB2_Clostridiales_37_7_curated
ammonium transporter
13_1_40cm_3_scaffold_3537_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(4192..5883)
DNA (1692bp) protein (564aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003784AB1
Hef nuclease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Hef nuclease
13_1_40cm_3_scaffold_3537_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5915..6103)
DNA (189bp) protein (63aa)
M6 family metalloprotease domain-containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3537_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6100..8589)
DNA (2490bp) protein (830aa)
ina; M6 family metalloprotease domain-containing protein (EC:3.4.24.-)
hypothetical protein, partial n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI000376AC13 rbh
M6 family metalloprotease domain-containing protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3537_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

8735..9832
DNA (1098bp) protein (366aa)
aspartate transaminase (EC:2.6.1.1) Tax=RBG_16_Euryarchaeota_68_12_curated
aspartate transaminase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=mine drainage metagenome RepID=T1BAA7_9ZZZZ
13_1_40cm_3_scaffold_3537_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(9887..10066)
DNA (180bp) protein (60aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3537_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10161..10310)
DNA (150bp) protein (50aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_3_scaffold_3537_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10361..11032)
DNA (672bp) protein (224aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein id=14428945 bin=bin3_NC10 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_3_scaffold_3537_12

Not on your lists

11136..12059
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1BEG4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD52545.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_3537_13
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(12620..15139)
DNA (2520bp) protein (840aa)
Na-Ca exchanger/integrin-beta4 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein SclubSA_08177 id=1843280 bin=GWB2_Proteobacteria_55_19 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Na-Ca exchanger/integrin-beta4
13_1_40cm_3_scaffold_3537_14
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15371..15838)
DNA (468bp) protein (156aa)
DSBA oxidoreductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF55_9BACT
protein-disulfide isomerase
Protein-disulfide isomerase {ECO:0000313|EMBL:AIF83220.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus
13_1_40cm_3_scaffold_3537_15
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15858..16523)
DNA (666bp) protein (222aa)
Peroxiredoxin n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1D4_DESTA
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AFM23375.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (st
13_1_40cm_3_scaffold_3537_16
Bacillus weihenstephanensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17009..18226)
DNA (1218bp) protein (406aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Bacillus weihenstephanensis (strain KBAB4) RepID=A9VVC6_BACWK
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:ABY46741.1}; TaxID=315730 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" sou
YVTN beta-propeller repeat-containing protein
13_1_40cm_3_scaffold_3537_17
Caldisphaera lagunensis, Caldisphaera, Acidilobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(18606..20954)
DNA (2349bp) protein (783aa)
Uncharacterized protein n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0ACF1_CALLD
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFZ70725.1}; Flags: Precursor;; TaxID=1056495 species="Archaea; Crenarchaeota; Thermoprotei; Acidilobales; Caldisphaeraceae; Caldisphaera.;" source="Caldispha
13_1_40cm_3_scaffold_3537_trna_1
unknown

Not on your lists

comp(21137..21211)
DNA (75bp)
transferRNA
13_1_40cm_3_scaffold_3537_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(21253..21819)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EC543
Na+/solute symporter Tax=RBG_16_Euryarchaeota_68_12_curated
Na+/solute symporter
13_1_40cm_3_scaffold_3537_19
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(21942..22700)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003780283 rbh
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_3_scaffold_3537_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(22929..23489)
DNA (561bp) protein (187aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HKS6_ACIS0
translation initiation factor IF-2 subunit alpha Tax=RBG_16_Euryarchaeota_68_12_curated
translation initiation factor 2, alpha subunit (eIF-2alpha)
Displaying 21 items

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