ggKbase home page

13_1_40cm_3_scaffold_22691_3

Organism: 13_1_40CM_3_Thaumarchaeota_50_5

near complete RP 30 / 55 MC: 2 BSCG 17 / 51 MC: 1 ASCG 35 / 38 MC: 3
Location: 1306..1494

Top 3 Functional Annotations

Value Algorithm Source
rpoE``; DNA-directed RNA polymerase, subunit E`` (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 62.0
  • Bit_score: 121
  • Evalue 6.60e-26
Transcription elongation factor Spt4 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBW1_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 62.0
  • Bit_score: 123
  • Evalue 1.10e-25
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 62.0
  • Bit_score: 121
  • Evalue 3.30e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 189
TTGGCCAAGGAAAAGGCATGCAGGAAGTGCAAGGTCATAACCACCGGTAAGGTGTGTCCCAACTGTAAGTCAACAGACCTGAGCCCCGACTGGTCTGGCATCATACTTGTTTTCGAGCCTGCCAAGTCTCGGGTTGCTAAGACACTTGACATCACCACCGCCAACAAGTATGCCCTGAAGGTTTCATAG
PROTEIN sequence
Length: 63
LAKEKACRKCKVITTGKVCPNCKSTDLSPDWSGIILVFEPAKSRVAKTLDITTANKYALKVS*