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cg1_0.2_scaffold_5375_c_9

Organism: CG1_02_FULL_Woesearchaeota_47_18_curated

partial RP 32 / 55 MC: 5 BSCG 14 / 51 ASCG 29 / 38 MC: 2
Location: 8286..8924

Top 3 Functional Annotations

Value Algorithm Source
Nonsense mediated mRNA decay protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JI58_HALVA similarity UNIREF
DB: UNIREF100
  • Identity: 25.8
  • Coverage: 194.0
  • Bit_score: 69
  • Evalue 6.20e-09
  • rbh
nmd3; putative nonsense mediated mRNA decay protein/NMD3 family protein; K07562 nonsense-mediated mRNA decay protein 3 Tax=CG_Woesearch_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 212.0
  • Bit_score: 418
  • Evalue 7.60e-114
NMD3 family protein similarity KEGG
DB: KEGG
  • Identity: 25.3
  • Coverage: 217.0
  • Bit_score: 67
  • Evalue 3.90e-09

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Taxonomy

CG_Woesearch_01 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 639
ATGGCTAAAAAACCAGGATTACGGGGCCTGAGCATGAATCAGCAGTACTACGAGGCTATTCTGCAGCTCCGCAGCCCTAGCGAGAAGGTTACGGACTTCGTGGTGTCTGCTATAAACAGAGCCTCAAGAAAAACCCTGGTTTCCAGGGTTGTCACTCTCAAAACAGGAGTGGACCTGTTTATAAGCTCAAGGGCCTTTGCAGTCAGCCTTGGCAGGAGGCTCTTTGGATGCTTCGGGGGCAGTCTGGAGATAAGCAAGCGCCTCTATGGCCTAAGTAAGGATAACAAGAGGGTTTACCGCGTATCTGTCCTGTTTAAGCCCCCTTGCTTCAGGCAGGGCGACGTGATACTCTATGAGGGCCACATTGTCCTTGTAAGCTCGCTTGGCAGGCAGGCAAAGGGGACTGACCTTGATACCGGAAGGAGGGCTGTGATTGACTACAAGAAGGATGCTGAGCGCCTCGAGGTTAGGAAGAGCGTGGTTACAAAGCTGCACCCATGGCTTGAGGCAATGCACCCGGAGACATTTGAGACGAGGCCTGTCTACAACAAGGAATATGCATCTGGGTTAGGGCTTAGGCAAGGGAGCAGGGTGAGGGTTGTGCTCAGTCAGGGGAGGGTGTATGCGGTTGATTGTTGA
PROTEIN sequence
Length: 213
MAKKPGLRGLSMNQQYYEAILQLRSPSEKVTDFVVSAINRASRKTLVSRVVTLKTGVDLFISSRAFAVSLGRRLFGCFGGSLEISKRLYGLSKDNKRVYRVSVLFKPPCFRQGDVILYEGHIVLVSSLGRQAKGTDLDTGRRAVIDYKKDAERLEVRKSVVTKLHPWLEAMHPETFETRPVYNKEYASGLGLRQGSRVRVVLSQGRVYAVDC*