ggKbase home page

qh_10_scaffold_7329_6

Organism: QH_10_Halobacteriales_69_21

partial RP 8 / 55 MC: 1 BSCG 12 / 51 MC: 1 ASCG 24 / 38
Location: comp(3549..4127)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHZ5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 190.0
  • Bit_score: 327
  • Evalue 8.70e-87
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 190.0
  • Bit_score: 327
  • Evalue 1.20e-86
transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 192.0
  • Bit_score: 321
  • Evalue 2.30e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 579
AAGGAGCGGAATCTCAAGCAGGCGTTGGGGGAGATCGACCGGATGGCGTCGGCGCTGGGGCTACCGGAGAGCGTCCGGGAGACCGCCTCGGTAATCTACCGACGGGCGCTGGACGAGGATCTCTTGCCCGGTCGTTCCATCGAGGGTGTCGCCACCGCGTCGCTGTACGCCGCGGCCCGCCAGGCGAGCACGCCGCGGAGCCTCGACGAGGTCTCGACGGTCTCCCGGGTCGGGAAGGACGAGATCGCCCGCACGTACCGATACGTCGTCCGGGAACTCGGCCTCGAGATCGAGCCCGCCGACCCGAAGAGCTACCTCCCGCGGTTCGTCAGCGAGCTCCAGCTGCCGGACGAGGTCGAGCGCCGCGCCCGCGAACTGCTGGACACGGCCGCCGAGGCCGGCGTCCACTCCGGGAAGTCCCCGGTCGGGCTGGCCGCGGCCGCCATCTACGCCGCCTCGCTGCTCTGCAACGAGAAGGTCACCCAAAACGAGGTCAGCGAGGTCGCGAACATCTCGGAGGTCACCATCCGGAACCGGTACCACGAGTTGCTCGAGGCCGAGAAGGACCTCCAGATGTAG
PROTEIN sequence
Length: 193
KERNLKQALGEIDRMASALGLPESVRETASVIYRRALDEDLLPGRSIEGVATASLYAAARQASTPRSLDEVSTVSRVGKDEIARTYRYVVRELGLEIEPADPKSYLPRFVSELQLPDEVERRARELLDTAAEAGVHSGKSPVGLAAAAIYAASLLCNEKVTQNEVSEVANISEVTIRNRYHELLEAEKDLQM*