ggKbase home page
This organism can only be binned in the context of its binning project GWA2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

qh_10_scaffold_3228_2

Organism: QH_10_Halobacteria_71_24

partial RP 23 / 55 MC: 3 BSCG 21 / 51 MC: 1 ASCG 21 / 38 MC: 1
Location: 1293..1919

Top 3 Functional Annotations

Value Algorithm Source
Halorhodopsin n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CC98_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 208.0
  • Bit_score: 282
  • Evalue 3.50e-73
capsular polysaccharide biosynthesis protein CpsH similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 209.0
  • Bit_score: 283
  • Evalue 5.80e-74
Halorhodopsin {ECO:0000313|EMBL:ELZ20268.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 208.0
  • Bit_score: 283
  • Evalue 2.20e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 627
GTGTCGATCTCCTCGTACACCTCCCTGCTGTCGGGGCTGACCGTCGACATGATCATGCTCCCCGACGGCCACCCTCTCGCCGGCGAGCCGCAGTTCTCCTCGTGGGGTCGTTACCTCACGTGGACGCTGTCGACGCCGGCGATCCTCGTCGGGCTCGGCCTGCTCGCCGGCACTGACTTCACGAAGCTGTTCACCGCGGTGACGATGGACATCGCGATGTGTGTCACCGGCCTCGCGGCCGCGCTGATCACCAGCTCGCTGGCGCTGCGGTGGGTGTTCTACGGCATCAGCTGTGCGTTCTTCCTCGTCGTCGTCTACATCCTGCTCGCGGAATGGCCAGCCGACGCCGCTGCCGCCGGCACCGGCGAGATCTTCAGCACACTGAAGCTCCTCACGGTAGTGTTGTGGTTCGGGTACCCGATCGTCTGGGCGGTCGGCATCGAGGGCTTGGCGCTGATCGAGAGCGCGGGTGTCATCTCGTGGGCGTACTCCGCGCTCGACATCCTCGCGAAGTACGTCTTCGCGTTCCTGTTGTTGAACTGGGTGCGCAACAACCAGGACATCGTCGGTGACGGCCCGTCGCTGCTCGGGTCCAGTTCCGACTCCGCCGCGGCCGCCGCCGACTGA
PROTEIN sequence
Length: 209
VSISSYTSLLSGLTVDMIMLPDGHPLAGEPQFSSWGRYLTWTLSTPAILVGLGLLAGTDFTKLFTAVTMDIAMCVTGLAAALITSSLALRWVFYGISCAFFLVVVYILLAEWPADAAAAGTGEIFSTLKLLTVVLWFGYPIVWAVGIEGLALIESAGVISWAYSALDILAKYVFAFLLLNWVRNNQDIVGDGPSLLGSSSDSAAAAAD*