ggKbase home page

qh_6_scaffold_623_13

Organism: QH_6_Halobacteriales_66_18

near complete RP 35 / 55 MC: 6 BSCG 29 / 51 MC: 3 ASCG 37 / 38 MC: 4
Location: 10118..11494

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 467.0
  • Bit_score: 554
  • Evalue 1.10e-154
Probable tRNA pseudouridine synthase D n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LMB0_HALJP similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 467.0
  • Bit_score: 554
  • Evalue 8.00e-155
tRNA pseudouridine synthase, TruD family similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 467.0
  • Bit_score: 549
  • Evalue 7.30e-154

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haloarcula japonica → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1377
ATGCGCGAGGCACACGACCGCGAGCAGGCGACCGGCGTCGACTACTACGTCAGCGACGCCGACGGGACGGGTGGCCGCCTCCGGGCCGCCCCCGAGGACTTCCGCGTCCGCGAGCTGGAGGCGTTCGACTACGAGCCGCTCGACGCCGACCCGGGGTCGTACGCCCATCTCGCGTTTCGGGCGACCCTGCGCGGCTGGGACACGAACGACTTCGCGGGCGCGCTCGCCTCGAAGCTCGGCATCTCTCGCGAACGGGTGTCGTGGGCCGGGACGAAGGACAAGGACGCGGTGACGACACAGCTGTTCTCCGTCCAAGGGATCGCTCCCGACGCGCTCCCGACGCTCGGCGAGGCCGACATCGAGCCGCTCGGCCGCGCGGGACGGCCGGTGCTGTTCGGCGACCTCGCGGGCAACGCCTTCGAGGTGACCATCGCCGACCCCGACACGCCGGCGAACGCCGCCCGCGTGACGGCGCAGTTGGGCGCGTTCGGCGGCAGGGAGGGCGACGCCGCGGACGACACGGGTGAGCGCCGGATCGGCGTGCCGAACTTCTACGGCCCACAGCGGTTCGGGAGCGCGCGACCGGTGACCCACCGGGTCGGGCTGGCGCTCCTGCGCGGCGAGTGGCAAGACGCCGTCCGGACCTACGTCTGTCACCGCACGGACGCGGAGCCGGCCGAGAGCGCCAGCGCTCGCGAACGGGTCGCCGAGCGCTGGGGCGACGACCCGGGGGCGCTGACCGAACTGCTCCCCGGTCGCCTCCGCTACGAGCGGTCGCTGCTACAGGGACTCGCAGAAGCGGGCGGCTACACCGCCGAGGACTGTCGGCACGCGCTGGAGCGTCTGCCGTCGAATCTCCAGCAGCTGTTCGTCCACGCCGCGCAGTCGTTCGCGTTCAACCGCATCCTCTCCGCGCGGCTGGAGCGCGGCCTGCCGTTCGACGAAGCCGTCGCGGGTGACGTCGTCTGCTTCGCCGACCGAGACCGGACCGTCTCGACCGGCGACGCGGCCCTCGCCGTACCGGACCCCGACCGCGCACAGCGGGTCGACGCCGACCGCGTGGCGACGGTGAACCGGCACGTCGAGCGCGGCCGAGCCTTCGTCACCGCGCCGCTGGTCGGCACGGACACCGAGTTCGCGGACGGCGAGCCGGGGGAGATAACTCGGTCGGTGTTGGACGACCTCGACCTCGCCCGCGCGGATTTCGACCTCCCCGGCGAGTTCGGCTCGGACGGGACGCGCCGCGCGATACTTCTCACCACCGACCTCGCCGTGCGCCGCGACCCGCTCACCTTCTCCTTCGCGCTGCCGAAAGGGAGCTACGCGACGACGCTGCTGCGCGAGTATCTGAAGACGGATCCGACGGCACTAGGCTGA
PROTEIN sequence
Length: 459
MREAHDREQATGVDYYVSDADGTGGRLRAAPEDFRVRELEAFDYEPLDADPGSYAHLAFRATLRGWDTNDFAGALASKLGISRERVSWAGTKDKDAVTTQLFSVQGIAPDALPTLGEADIEPLGRAGRPVLFGDLAGNAFEVTIADPDTPANAARVTAQLGAFGGREGDAADDTGERRIGVPNFYGPQRFGSARPVTHRVGLALLRGEWQDAVRTYVCHRTDAEPAESASARERVAERWGDDPGALTELLPGRLRYERSLLQGLAEAGGYTAEDCRHALERLPSNLQQLFVHAAQSFAFNRILSARLERGLPFDEAVAGDVVCFADRDRTVSTGDAALAVPDPDRAQRVDADRVATVNRHVERGRAFVTAPLVGTDTEFADGEPGEITRSVLDDLDLARADFDLPGEFGSDGTRRAILLTTDLAVRRDPLTFSFALPKGSYATTLLREYLKTDPTALG*