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qh_7_scaffold_7013_3

Organism: QH_7_Haloarcula_66_14

near complete RP 31 / 55 MC: 6 BSCG 15 / 51 ASCG 31 / 38
Location: comp(2947..4074)

Top 3 Functional Annotations

Value Algorithm Source
Nonsense mediated mRNA decay protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K0R8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 379.0
  • Bit_score: 620
  • Evalue 9.70e-175
Nonsense mediated mRNA decay protein {ECO:0000313|EMBL:EMA14373.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sina similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 379.0
  • Bit_score: 620
  • Evalue 1.40e-174
nmd3; nonsense mediated mRNA decay protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 379.0
  • Bit_score: 619
  • Evalue 4.70e-175

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Taxonomy

Haloarcula sinaiiensis → Haloarcula → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1128
ATGAGCCGGTCCGGAGCCTTCTGTCCGAAGTGTGGCGACGAGTTCGAGCCACCCGAGGACCGCCCCGCGCTCCCGGGCGCACAGCGGGACTCCGAACGAGTCCTCTGTGACGCCTGCTACTTCGAGGAGTTCGACCTGGTGGACGCCCCGGAGACCATCGAGGTCCGGGTGTGTGCCCAGTGTGGCGCGGTCCACAAGGGGAACCGCTGGGTCGACGTGGGCGCCGACGACTACACCGATATCGCCGTCGAACAGGTCAGCGAGGCGCTGGGCGTCCACGTCGACGCCGAGAACGTCGAGTGGCAGGTCGCGCCCGAGCAACTCGACCGGAACAACATCCGGATGCACACGGAGTTCTCGGGCGTCGTCCGGGGCGTCCCGGTCCACGAGCAGGTGCGCGTCCCGGTGCGTATCGCCCGCGGGACGTGCAAGCGCTGCGGGAAGATAGCCGGCGGCTCCTTCGCCAGCGTCGTCCAGATACGCGCCGACGAGCGGGCGCCGACCGACGAGGAGGTCGAACGCGCCGAGACCATCGCCGAGGAGTACATCGCCGAGCGGGAAGCAACGGGGGACCGCAACGCCTTCATCACGGAGACTAGCGAGGTCGACGGCGGGCTGAACATGAAGATATCGACGACCCAGATGGGCCACGGCATCGCCAAGCGCATCACGGCCCAGCTCGGCGGGAGCTACGCCGACTCGAAGCGCCTCATCACAGAGGACGAGGACGGCCAGAAGCTCTACCGGATGACCTACGCCGTCCGCCTGCCCCGTTACCGTCGGGGCGAACTCATCGACCCCGAGGACGGTGACGGCCCCGTTCTCGTGCGCTCGGTCCAGGGGAACCTCAAGGGCGTGCGACTCGCGACCGGCGAGGCCTACGAGGCCCGGTTCGAGGAGGGCGACGCGCCCGACGCCCGGCGGCTGGGGTTCCGGGAGGACGGCGAGCCGACGACGCTCGTCGCCGTCGAGGACGACAACGCCGTCCAGGTGCTGGACCCGGAAACCTTCGAGAGCGTGACCGTCCCGCGGCCCGACTACCTCGATACGGCCGCCGACGAGGTGCCGGTCGTCAAGAGCCGCGCCGGCCTGCACGTCCTGCCGGCGGCCGAGCGCGACGATGAGTAA
PROTEIN sequence
Length: 376
MSRSGAFCPKCGDEFEPPEDRPALPGAQRDSERVLCDACYFEEFDLVDAPETIEVRVCAQCGAVHKGNRWVDVGADDYTDIAVEQVSEALGVHVDAENVEWQVAPEQLDRNNIRMHTEFSGVVRGVPVHEQVRVPVRIARGTCKRCGKIAGGSFASVVQIRADERAPTDEEVERAETIAEEYIAEREATGDRNAFITETSEVDGGLNMKISTTQMGHGIAKRITAQLGGSYADSKRLITEDEDGQKLYRMTYAVRLPRYRRGELIDPEDGDGPVLVRSVQGNLKGVRLATGEAYEARFEEGDAPDARRLGFREDGEPTTLVAVEDDNAVQVLDPETFESVTVPRPDYLDTAADEVPVVKSRAGLHVLPAAERDDE*