ggKbase home page

qh_9_scaffold_5356_1

Organism: QH_9_Halobacteriales_65_22

partial RP 31 / 55 MC: 4 BSCG 28 / 51 ASCG 28 / 38 MC: 6
Location: 3..401

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrine similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 133.0
  • Bit_score: 237
  • Evalue 1.50e-59
tRNA-splicing ligase RtcB n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JL38_NATP1 similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 133.0
  • Bit_score: 237
  • Evalue 1.10e-59
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 133.0
  • Bit_score: 237
  • Evalue 3.00e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natrinema pellirubrum → Natrinema → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 399
CGGAAGGGAGCGACCCGAGCATTCCCGCCCGGTCATCCCGAGGTTCCGTCGGCGTATCGCGACACCGGCCAGCCGGTTATCATCCCCGGCTCGATGGGAGCCGGCTCGTACGTCCTCTCGGGCGGCGAGCAGTCGCTCTCGGAGACGTTCGGCTCGACGGCACACGGCGCTGGCCGGCTGATGTCACGCACCCGGGCGAAAGACGAGTTCTGGGGGAGTGACGTACAGGACGATCTCGAAGCACGACAGGTGTACGTGCGGGCGTCATCGGGAGCGACCATCGCCGAGGAAGCACCGGGCGTCTACAAGGACATCGACGAGGTCGTTCGCGTCTCTGACGCGCTCGGCATCGGTGACAAGGTGGCCCGGACGTTTCCGGTCTGTAACATCAAGGGCTGA
PROTEIN sequence
Length: 133
RKGATRAFPPGHPEVPSAYRDTGQPVIIPGSMGAGSYVLSGGEQSLSETFGSTAHGAGRLMSRTRAKDEFWGSDVQDDLEARQVYVRASSGATIAEEAPGVYKDIDEVVRVSDALGIGDKVARTFPVCNIKG*