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QH_9_Halobacteriales_69_42

In projects: QH_9  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QH_9_UNK

Properties

Avg. coverage: 42.30 Longest contig: 16.90 Kbp Bin length: 2.92 Mbp GC content: 68.84 %
Contigs count: 574 Features count: 3456 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 10 / 55 MC: 1 BSCG 10 / 51 MC: 1 ASCG 25 / 38 MC: 8
Displaying items 1-50 of 574 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_9_scaffold_1414
Class: Halobacteria (76.47%)
17 13993 bp 70.14 37.23 89.81
qh_9_scaffold_1311
Class: Halobacteria (64.71%)
17 11627 bp 63.23 30.82 78.93
qh_9_scaffold_615
Order: Haloferacales (62.5%)
16 15417 bp 59.32 22.00 79.04
qh_9_scaffold_1131
Order: Halobacteriales (81.25%)
16 16721 bp 69.09 51.44 86.35
qh_9_scaffold_1076
Genus: Natronomonas (53.33%)
15 13372 bp 67.64 40.07 83.12
qh_9_scaffold_1749
Species: Natronomonas pharaonis (60%)
15 11130 bp 69.60 39.42 81.67
qh_9_scaffold_534
Order: Halobacteriales (66.67%)
15 10025 bp 71.92 46.95 88.37
qh_9_scaffold_1327
Order: Halobacteriales (57.14%)
14 9832 bp 68.36 41.29 76.65
qh_9_scaffold_526
Class: Halobacteria (85.71%)
14 15100 bp 69.11 37.42 94.11
qh_9_scaffold_1604
Order: Natrialbales (64.29%)
14 15251 bp 72.15 40.40 90.13
qh_9_scaffold_1908
Species: Natronomonas pharaonis (64.29%)
14 9798 bp 73.93 54.16 85.76
qh_9_scaffold_3020
Class: Halobacteria (71.43%)
14 10194 bp 69.26 42.06 78.49
qh_9_scaffold_4950
Genus: Natronomonas (69.23%)
13 8122 bp 70.23 42.12 66.78
qh_9_scaffold_1711
Class: Halobacteria (61.54%)
13 12730 bp 72.54 44.25 84.06
qh_9_scaffold_1253
Class: Halobacteria (53.85%)
13 10660 bp 67.07 40.38 82.15
qh_9_scaffold_975
Genus: Natronomonas (61.54%)
13 8669 bp 72.72 48.78 82.81
qh_9_scaffold_3097
Class: Halobacteria (53.85%)
13 11167 bp 68.94 47.21 79.17
qh_9_scaffold_5685
Class: Halobacteria (76.92%)
13 11871 bp 70.57 44.01 82.74
qh_9_scaffold_3387
Order: Halobacteriales (61.54%)
13 10097 bp 70.74 48.15 78.91
qh_9_scaffold_1109
Order: Halobacteriales (61.54%)
13 13323 bp 66.82 35.70 80.03
qh_9_scaffold_3427
Genus: Natronomonas (75%)
12 10218 bp 67.79 44.22 90.28
qh_9_scaffold_3319
Genus: Natronomonas (50%)
12 10706 bp 71.88 43.13 69.21
qh_9_scaffold_502
Order: Halobacteriales (66.67%)
12 16896 bp 67.45 40.09 84.64
qh_9_scaffold_2624
Class: Halobacteria (66.67%)
12 9196 bp 68.90 40.83 76.17
qh_9_scaffold_3207
Genus: Natronomonas (66.67%)
12 7824 bp 64.62 37.35 72.51
qh_9_scaffold_1859
Order: Halobacteriales (58.33%)
12 11482 bp 68.72 34.18 80.92
qh_9_scaffold_2182
Species: Natronomonas pharaonis (50%)
12 12143 bp 66.16 41.38 87.11
qh_9_scaffold_1403
Order: Halobacteriales (50%)
12 11182 bp 70.94 50.83 90.95
qh_9_scaffold_6189
Class: Halobacteria (91.67%)
12 9101 bp 65.96 36.44 63.32
qh_9_scaffold_2819
Genus: Natronomonas (66.67%)
12 9511 bp 69.82 34.81 70.37
qh_9_scaffold_1665
Order: Natrialbales (54.55%)
11 9981 bp 60.99 21.61 98.59
qh_9_scaffold_1595
Genus: Natronomonas (63.64%)
11 9790 bp 67.66 43.07 79.21
qh_9_scaffold_7414
Class: Halobacteria (81.82%)
11 4142 bp 67.33 35.32 80.83
qh_9_scaffold_910
Genus: Natronomonas (72.73%)
11 8139 bp 72.13 46.22 88.91
qh_9_scaffold_2228
Class: Halobacteria (90.91%)
11 8420 bp 66.91 47.94 64.20
qh_9_scaffold_2376
Order: Haloferacales (54.55%)
11 11458 bp 68.55 42.65 79.96
qh_9_scaffold_3392
Genus: Natronomonas (54.55%)
11 9331 bp 70.72 51.24 81.50
qh_9_scaffold_1269
Species: Natronomonas moolapensis (54.55%)
11 10562 bp 71.83 51.93 89.05
qh_9_scaffold_2383
Order: Halobacteriales (60%)
10 7867 bp 72.86 40.74 90.72
qh_9_scaffold_7386
Genus: Natronomonas (50%)
10 6788 bp 71.64 39.72 73.85
qh_9_scaffold_3303
Order: Halobacteriales (60%)
10 7570 bp 61.07 29.68 73.32
qh_9_scaffold_2663
Order: Halobacteriales (50%)
10 6004 bp 70.99 49.09 83.09
qh_9_scaffold_4599
Order: Halobacteriales (60%)
10 9583 bp 71.09 44.23 88.09
qh_9_scaffold_2980
Genus: Natronomonas (50%)
10 6971 bp 70.13 47.08 88.39
qh_9_scaffold_12863 10 3870 bp 58.73 20.93 79.92
qh_9_scaffold_3241
Genus: Natronomonas (70%)
10 5657 bp 66.61 37.65 77.64
qh_9_scaffold_983 10 7013 bp 65.54 37.05 76.49
qh_9_scaffold_1608
Order: Halobacteriales (70%)
10 9046 bp 71.42 46.25 90.57
qh_9_scaffold_3555
Order: Halobacteriales (50%)
10 7668 bp 72.91 48.50 83.72
qh_9_scaffold_4319
Order: Halobacteriales (70%)
10 9360 bp 71.28 47.38 93.94
Displaying items 1-50 of 574 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.