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This organism can only be binned in the context of its binning project SCN18_25_1_16_R5_B. Please contact the project owner (rohansach@berkeley.edu) to become a member and gain access.

qs_4_scaffold_452_17

Organism: QS_4_Halobacteriales_71_28

near complete RP 34 / 55 MC: 3 BSCG 27 / 51 MC: 1 ASCG 34 / 38
Location: 13948..14274

Top 3 Functional Annotations

Value Algorithm Source
Protein translation factor SUI1 homolog n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NA34_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 99.0
  • Bit_score: 116
  • Evalue 2.30e-23
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 99.0
  • Bit_score: 116
  • Evalue 3.10e-23
translation initiation factor aIF-1 homolog similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 99.0
  • Bit_score: 114
  • Evalue 1.40e-23

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Taxonomy

Halococcus thailandensis → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 327
ATGGCAAGAGACGACAGCGACGACGTGACCGGGCTCCCGGACGACCTCGGTATCGGCGACGACCTGGCGCGCTCCCAGCAGCGGCTCTCGATCGGCCTTAAGGAGCGCCGCTACGGCAGGGCCGTGACGATCGTCAAGGGGTTCGACGCCAGCGACGGCACCGATCTCTTCGACCTGGCGTCGACGCTCAAGCGCCGCCTCGCGACCGTCGGCGCCGTCGGCGACGGCCGCATCCGACTCCAGGGCGACCATACCGACCGGCTCCCCGAACTCCTCCGCGAGGAGGGGTTCGCGGTCGTCGGCCAGGGCGATCCCGAGGCCGTCTAG
PROTEIN sequence
Length: 109
MARDDSDDVTGLPDDLGIGDDLARSQQRLSIGLKERRYGRAVTIVKGFDASDGTDLFDLASTLKRRLATVGAVGDGRIRLQGDHTDRLPELLREEGFAVVGQGDPEAV*