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sw_10_scaffold_8013_2

Organism: SW_10_Nanohaloarchaea_43_6

partial RP 25 / 55 MC: 7 BSCG 13 / 51 MC: 1 ASCG 21 / 38 MC: 10
Location: comp(1590..2378)

Top 3 Functional Annotations

Value Algorithm Source
rpr41; exosome RNA binding protein (EC:3.1.13.-); K12589 exosome complex component RRP42 id=18315916 bin=Nanosalinarum tax=Nanosalinarum similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 261.0
  • Bit_score: 346
  • Evalue 1.90e-92
RNase PH-related exoribonuclease {ECO:0000313|EMBL:EGQ39698.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56 similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 261.0
  • Bit_score: 346
  • Evalue 2.70e-92
rrp42p; exosome complex RNA-binding protein Rrp42 similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 256.0
  • Bit_score: 240
  • Evalue 5.40e-61

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Taxonomy

Candidatus Nanosalinarum sp. J07AB56 → Candidatus Nanosalinarum → Nanohaloarchaea → Nanohaloarchaeota → Archaea

Sequences

DNA sequence
Length: 789
ATGAAGCTAAACGAAAGAACAATCCGGAAGATGATCAAAGACGGAGAAAGACTCGACGGACGTGACCTCGGAGAGTTCCGGGACATCGAAGTCGAAACCGACTACATCAACGAGACCGCGGAAGGAAGCGCACGAGTCAAGATAGGCAAGACTCACGTAGTAGTCGGACTCAAGATCGGACTGGAGGAGCCTTACTCCGACCGACCTGATGAAGGAACAATCGTGACCAACGCGGAGCTTGCTCCGATGGCAGCACGAGAGTACGAGTCAGGACCTCCACAGGAGCCAGGAGTCGAACTTGCAAGAGTTGTCGACCGAGGAATCAGAGAAAGCGAAGCAATCGACCTCGAAGAACTCTGTATCGAACCTGGAGAAAAAGTCATGACAGTATTCATCGACGTACACGTCCTCAACGACGATGGAAATCTGATCGATGCTTCATCGCTCGGAGCGATGGCAGCACTCAAGACAGGATTCATCCCGGTCTACGACGAGGAAGAAGATGAACTTGTCCGTGACGAAAAGGAAAGAGACATTCCGCTCGAGAAAGAACCTGTGACAGTTACAGGACACAAGATCGAGGACCAGATCCTCTGGGACACAACCGGGGAAGAAGAGGAAGCACAGGACGCACGTCTTACAGTATCCTTGAAGCAGGACGGCAACGTTGTCGCAATGCAGAAAGGAGAACGAGAGCCACTCTCACAGGAAGAAGTGATGGAGATAGTCAAGACGGCGGAAGATAAGACAGACATGCTCCGGGAAATCCTCGAAGAAGCGGCTGAATAA
PROTEIN sequence
Length: 263
MKLNERTIRKMIKDGERLDGRDLGEFRDIEVETDYINETAEGSARVKIGKTHVVVGLKIGLEEPYSDRPDEGTIVTNAELAPMAAREYESGPPQEPGVELARVVDRGIRESEAIDLEELCIEPGEKVMTVFIDVHVLNDDGNLIDASSLGAMAALKTGFIPVYDEEEDELVRDEKERDIPLEKEPVTVTGHKIEDQILWDTTGEEEEAQDARLTVSLKQDGNVVAMQKGEREPLSQEEVMEIVKTAEDKTDMLREILEEAAE*